| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF D: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.0610 | |
| 2 | E | A | -1.4202 | |
| 3 | K | A | -2.1932 | |
| 4 | G | A | -1.4834 | |
| 5 | H | A | -1.4768 | |
| 6 | F | A | -0.4300 | |
| 7 | E | A | -0.7314 | |
| 8 | F | A | 1.4149 | |
| 1 | F | B | 2.0158 | |
| 2 | E | B | 0.4729 | |
| 3 | K | B | -0.7254 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -1.1074 | |
| 6 | F | B | -0.6942 | |
| 7 | E | B | -0.8987 | |
| 8 | F | B | 0.8411 | |
| 1 | F | C | 2.1783 | |
| 2 | E | C | 0.8464 | |
| 3 | K | C | -0.2710 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -0.9374 | |
| 6 | F | C | -0.7626 | |
| 7 | E | C | -0.8510 | |
| 8 | F | C | 0.8899 | |
| 1 | F | D | 1.1162 | |
| 2 | E | D | -1.3507 | |
| 3 | K | D | -2.1192 | |
| 4 | G | D | -1.3777 | |
| 5 | H | D | -1.2323 | |
| 6 | F | D | 0.0370 | |
| 7 | E | D | -0.3002 | |
| 8 | F | D | 1.6719 |