| Chain sequence(s) |
L: TGFGKINSEYWIG
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 88 | T | L | -0.2638 | |
| 89 | G | L | -0.1733 | |
| 90 | F | L | 1.7681 | |
| 91 | G | L | -0.2777 | |
| 92 | K | L | -1.4142 | |
| 93 | I | L | 1.4666 | |
| 94 | N | L | -0.9467 | |
| 95 | S | L | -0.7665 | |
| 96 | E | L | -1.7014 | |
| 97 | Y | L | 0.6739 | |
| 98 | W | L | 1.7092 | |
| 99 | I | L | 2.1527 | |
| 100 | G | L | -0.1388 |