| Chain sequence(s) |
H: EVQLVESGGGLVKPGGSLRLSCAASGFTFRSYGMNWVRQAPGKGLEWVSGISSSGSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDGGRTSYTATAHNWFDPWGQGTLVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLFSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHASAPPTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6035 | |
| 2 | V | H | -0.3421 | |
| 3 | Q | H | -0.4663 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0697 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2615 | |
| 8 | G | H | -0.8091 | |
| 9 | G | H | 0.0335 | |
| 11 | G | H | 0.8035 | |
| 12 | L | H | 1.3001 | |
| 13 | V | H | -0.3112 | |
| 14 | K | H | -1.8791 | |
| 15 | P | H | -2.0776 | |
| 16 | G | H | -1.5642 | |
| 17 | G | H | -1.3337 | |
| 18 | S | H | -1.3717 | |
| 19 | L | H | -1.0770 | |
| 20 | R | H | -2.0738 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4214 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0533 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.3577 | |
| 27 | G | H | -0.7634 | |
| 28 | F | H | -0.4299 | |
| 29 | T | H | -0.5872 | |
| 30 | F | H | 0.0000 | |
| 35 | R | H | -2.2046 | |
| 36 | S | H | -1.2782 | |
| 37 | Y | H | -0.8082 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6431 | |
| 45 | A | H | -1.0070 | |
| 46 | P | H | -0.8034 | |
| 47 | G | H | -1.4202 | |
| 48 | K | H | -2.2792 | |
| 49 | G | H | -1.4209 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9041 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.3652 | |
| 58 | S | H | -0.6431 | |
| 59 | S | H | -0.2618 | |
| 62 | G | H | -0.0994 | |
| 63 | S | H | 0.3846 | |
| 64 | Y | H | 1.2693 | |
| 65 | I | H | 1.5061 | |
| 66 | Y | H | 0.8707 | |
| 67 | Y | H | -0.3476 | |
| 68 | A | H | -1.1930 | |
| 69 | D | H | -2.4001 | |
| 70 | S | H | -1.7545 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4980 | |
| 74 | G | H | -1.6848 | |
| 75 | R | H | -1.5758 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7358 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3061 | |
| 80 | R | H | -1.0206 | |
| 81 | D | H | -1.5010 | |
| 82 | N | H | -1.8341 | |
| 83 | A | H | -1.4708 | |
| 84 | K | H | -2.2603 | |
| 85 | N | H | -1.7379 | |
| 86 | S | H | -0.9843 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5660 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.5480 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3637 | |
| 93 | S | H | -1.2526 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4455 | |
| 96 | A | H | -1.8084 | |
| 97 | E | H | -2.2511 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3893 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6461 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | G | H | 0.0000 | |
| 110 | R | H | -1.7891 | |
| 111 | T | H | -0.6810 | |
| 111A | S | H | -0.0623 | |
| 111B | Y | H | 1.0764 | |
| 111C | T | H | 0.6230 | |
| 112C | A | H | 0.5169 | |
| 112B | T | H | -0.1404 | |
| 112A | A | H | -0.0670 | |
| 112 | H | H | -0.6239 | |
| 113 | N | H | -0.6631 | |
| 114 | W | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.5178 | |
| 117 | P | H | -0.4595 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1284 | |
| 121 | G | H | -0.1007 | |
| 122 | T | H | 0.4983 | |
| 123 | L | H | 1.5239 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1977 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7373 | |
| 128 | S | H | -0.6378 | |
| 1 | D | L | -1.5748 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7489 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.9018 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.5437 | |
| 8 | P | L | -1.5398 | |
| 9 | D | L | -2.3704 | |
| 10 | S | L | -1.4902 | |
| 11 | L | L | -0.7962 | |
| 12 | A | L | -0.4280 | |
| 13 | V | L | -1.0324 | |
| 14 | S | L | -1.1674 | |
| 15 | L | L | -0.4091 | |
| 16 | G | L | -1.2609 | |
| 17 | E | L | -2.7825 | |
| 18 | R | L | -2.7805 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7670 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.9638 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.4091 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9593 | |
| 27 | Q | L | -1.5954 | |
| 28 | S | L | -0.9192 | |
| 29 | V | L | 0.0000 | |
| 30 | L | L | 0.0877 | |
| 31 | F | L | 0.1587 | |
| 32 | S | L | -0.6369 | |
| 33 | S | L | -0.8728 | |
| 34 | N | L | -1.5639 | |
| 35 | N | L | -1.6757 | |
| 36 | K | L | -0.9956 | |
| 37 | N | L | -0.4352 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.5496 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.1770 | |
| 46 | P | L | -0.7613 | |
| 47 | G | L | -1.2412 | |
| 48 | Q | L | -1.6947 | |
| 49 | P | L | -1.2362 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3144 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1696 | |
| 56 | W | L | -0.0876 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6596 | |
| 66 | T | L | -0.6789 | |
| 67 | R | L | -1.7232 | |
| 68 | E | L | -1.1985 | |
| 69 | S | L | -0.8819 | |
| 70 | G | L | -1.1520 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4230 | |
| 74 | D | L | -2.2309 | |
| 75 | R | L | -1.5019 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9494 | |
| 78 | G | L | -0.6099 | |
| 79 | S | L | -0.7194 | |
| 80 | G | L | -1.1940 | |
| 83 | S | L | -1.0327 | |
| 84 | G | L | -0.9159 | |
| 85 | T | L | -1.5250 | |
| 86 | D | L | -2.2749 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -1.1476 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7190 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.7034 | |
| 93 | S | L | -1.7911 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.3424 | |
| 96 | A | L | -0.8074 | |
| 97 | E | L | -1.8121 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.5046 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.4614 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | A | L | -0.1781 | |
| 109 | S | L | -0.5514 | |
| 114 | A | L | -0.3541 | |
| 115 | P | L | -0.7100 | |
| 116 | P | L | -0.2910 | |
| 117 | T | L | -0.1402 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9762 | |
| 121 | G | L | -1.1960 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5863 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.6991 | |
| 126 | I | L | -0.6086 | |
| 127 | K | L | -1.4477 |