| Chain sequence(s) |
A: CPGEGEECDVEFNPCCPPLTCIPGDPYGICYII
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.5520 | |
| 2 | P | A | -0.8836 | |
| 3 | G | A | -1.1105 | |
| 4 | E | A | -1.9279 | |
| 5 | G | A | -1.8447 | |
| 6 | E | A | -2.7486 | |
| 7 | E | A | -2.1515 | |
| 8 | C | A | 0.0000 | |
| 9 | D | A | 0.0000 | |
| 10 | V | A | 1.1923 | |
| 11 | E | A | -0.3213 | |
| 12 | F | A | 1.2499 | |
| 13 | N | A | 0.3913 | |
| 14 | P | A | 0.5170 | |
| 15 | C | A | 0.2580 | |
| 16 | C | A | 0.5538 | |
| 17 | P | A | 0.2772 | |
| 18 | P | A | 0.5948 | |
| 19 | L | A | 1.4524 | |
| 20 | T | A | 1.6158 | |
| 21 | C | A | 0.7690 | |
| 22 | I | A | 1.2564 | |
| 23 | P | A | 0.5320 | |
| 24 | G | A | -0.0171 | |
| 25 | D | A | -1.2640 | |
| 26 | P | A | -0.5338 | |
| 27 | Y | A | 0.4085 | |
| 28 | G | A | 0.0000 | |
| 29 | I | A | -0.1101 | |
| 30 | C | A | 0.0000 | |
| 31 | Y | A | 1.7370 | |
| 32 | I | A | 3.0363 | |
| 33 | I | A | 3.2038 |