Project name: query_structure

Status: done

Started: 2026-03-16 23:01:09
Settings
Chain sequence(s) A: CPGEGEECDVEFNPCCPPLTCIPGDPYGICYII
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-2.7486
Maximal score value
3.2038
Average score
0.2026
Total score value
6.6844

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.5520
2 P A -0.8836
3 G A -1.1105
4 E A -1.9279
5 G A -1.8447
6 E A -2.7486
7 E A -2.1515
8 C A 0.0000
9 D A 0.0000
10 V A 1.1923
11 E A -0.3213
12 F A 1.2499
13 N A 0.3913
14 P A 0.5170
15 C A 0.2580
16 C A 0.5538
17 P A 0.2772
18 P A 0.5948
19 L A 1.4524
20 T A 1.6158
21 C A 0.7690
22 I A 1.2564
23 P A 0.5320
24 G A -0.0171
25 D A -1.2640
26 P A -0.5338
27 Y A 0.4085
28 G A 0.0000
29 I A -0.1101
30 C A 0.0000
31 Y A 1.7370
32 I A 3.0363
33 I A 3.2038
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Laboratory of Theory of Biopolymers 2018