Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKSSGYIFSDYYIHWVRQAPGQGLEWMGRINPHSGGTNYAQNFQGRVTMTRDTSIATTYMEVSRLISDDTAMYYCARDLGTVFGVLSDAFDIWGQGTMVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32) [INFO] Main: Simulation completed successfully. (00:01:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4162 | |
2 | V | H | -0.5621 | |
3 | Q | H | -1.2834 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.2517 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5744 | |
8 | G | H | -0.5781 | |
9 | A | H | -0.0289 | |
11 | E | H | -0.2092 | |
12 | V | H | 0.8862 | |
13 | K | H | -0.5517 | |
14 | K | H | -1.8039 | |
15 | P | H | -1.2635 | |
16 | G | H | -1.4743 | |
17 | A | H | -1.2643 | |
18 | S | H | -1.3875 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.9106 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5456 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.7100 | |
25 | S | H | 0.0000 | |
26 | S | H | -0.2547 | |
27 | G | H | -0.5101 | |
28 | Y | H | 0.4165 | |
29 | I | H | 1.5535 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.6219 | |
36 | D | H | -1.2332 | |
37 | Y | H | -0.2243 | |
38 | Y | H | -0.1429 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | -0.4670 | |
44 | Q | H | -0.7302 | |
45 | A | H | -1.0018 | |
46 | P | H | -0.9889 | |
47 | G | H | -1.2180 | |
48 | Q | H | -1.7725 | |
49 | G | H | -1.1004 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8602 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | R | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -0.9038 | |
58 | P | H | 0.0000 | |
59 | H | H | -1.6986 | |
62 | S | H | -0.9948 | |
63 | G | H | -0.9556 | |
64 | G | H | -0.8356 | |
65 | T | H | -0.4435 | |
66 | N | H | -0.7820 | |
67 | Y | H | -0.9343 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.2705 | |
70 | N | H | -2.2736 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.2400 | |
74 | G | H | -1.6733 | |
75 | R | H | -1.5466 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.6958 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.4619 | |
80 | R | H | -0.9223 | |
81 | D | H | -0.8374 | |
82 | T | H | -0.5238 | |
83 | S | H | 0.1474 | |
84 | I | H | 0.7804 | |
85 | A | H | 0.2085 | |
86 | T | H | 0.0000 | |
87 | T | H | 0.0000 | |
88 | Y | H | -0.5807 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.1109 | |
91 | V | H | 0.0000 | |
92 | S | H | -1.3930 | |
93 | R | H | -2.0880 | |
94 | L | H | 0.0000 | |
95 | I | H | -0.1606 | |
96 | S | H | -0.6471 | |
97 | D | H | -1.1406 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.2134 | |
100 | A | H | 0.0000 | |
101 | M | H | 0.1082 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0421 | |
107 | D | H | 0.0000 | |
108 | L | H | 0.4523 | |
109 | G | H | 0.5364 | |
110 | T | H | 1.6706 | |
111 | V | H | 2.8421 | |
111A | F | H | 2.8932 | |
111B | G | H | 1.5448 | |
112B | V | H | 1.8674 | |
112A | L | H | 1.4662 | |
112 | S | H | 0.0000 | |
113 | D | H | 0.0000 | |
114 | A | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.2700 | |
117 | I | H | -0.0868 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.3018 | |
121 | G | H | -0.6311 | |
122 | T | H | 0.0000 | |
123 | M | H | 0.1917 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.0939 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5678 | |
128 | S | H | -0.6298 | |
1 | D | L | -1.6205 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7626 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.9140 | |
6 | Q | L | -1.4683 | |
7 | S | L | -1.5690 | |
8 | P | L | -1.4133 | |
9 | D | L | -2.3100 | |
10 | S | L | -1.3876 | |
11 | L | L | -0.5878 | |
12 | A | L | -0.2853 | |
13 | V | L | 0.0000 | |
14 | S | L | -0.9045 | |
15 | L | L | -0.2707 | |
16 | G | L | -1.0796 | |
17 | E | L | -2.2030 | |
18 | R | L | -2.5476 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.7977 | |
21 | I | L | 0.0000 | |
22 | N | L | -1.6619 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.3963 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.9990 | |
27 | Q | L | -1.5435 | |
28 | S | L | -0.8251 | |
29 | V | L | 0.0000 | |
30 | L | L | -0.0371 | |
31 | Y | L | 0.1180 | |
32 | S | L | -0.5994 | |
33 | S | L | -0.7102 | |
34 | N | L | -1.0478 | |
35 | N | L | -1.5976 | |
36 | K | L | -1.0289 | |
37 | N | L | -0.3602 | |
38 | Y | L | 0.0000 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -0.8576 | |
45 | K | L | -1.3462 | |
46 | P | L | -0.9400 | |
47 | G | L | -1.4710 | |
48 | Q | L | -2.0815 | |
49 | P | L | -1.3075 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.0639 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.1136 | |
56 | W | L | -0.1784 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5918 | |
66 | T | L | -0.5264 | |
67 | R | L | -1.3817 | |
68 | E | L | -1.1079 | |
69 | S | L | -0.7491 | |
70 | G | L | -0.9171 | |
71 | V | L | -1.0312 | |
72 | P | L | -1.3116 | |
74 | D | L | -2.2083 | |
75 | R | L | -1.5278 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8744 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.6954 | |
80 | G | L | -1.1682 | |
83 | S | L | -1.1113 | |
84 | G | L | -1.0077 | |
85 | T | L | -1.6125 | |
86 | D | L | -2.3212 | |
87 | F | L | 0.0000 | |
88 | T | L | -1.0290 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6608 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.5938 | |
93 | S | L | -1.6411 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.2094 | |
96 | A | L | -0.6530 | |
97 | E | L | -1.8063 | |
98 | D | L | 0.0000 | |
99 | V | L | 0.0361 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.3335 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | Y | L | 0.5416 | |
109 | S | L | -0.3276 | |
113 | T | L | -0.2503 | |
114 | P | L | -0.6164 | |
115 | P | L | -0.7436 | |
116 | L | L | 0.0000 | |
117 | T | L | 0.0608 | |
118 | F | L | 0.2159 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.9857 | |
121 | G | L | -1.1628 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.4019 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.1905 | |
126 | I | L | 0.2173 | |
127 | K | L | -1.2102 |