| Chain sequence(s) |
A: GPLPLNPEPELLPTSEYVKPTDLFYVAETDLITETGHPTKDIVENGKVVIPRVSAYDWLVFKLTLPDPNTLPLPSEDFVDPSTEILIWQLKAYKIEVYGPLGKGSYGHSNFNRLGDVTNPTSYQHETADDTQNYSWYPKRLQSYIIGDLPPLGVYTTPAPPAPGLPPGAPPPTTEVTTIIQHGDRADIGFGARDFAALDPRKDNVPDLIRDTKTVVIDYDGMKAEPTGRRMFDHDEKESSSNSENLVYCGPDLIPPPNEPPPSKLYVKPPASSPYAIPPSTNYFTIPDQGEITEDDLLFNKPIFLTKTPGKNNGVLWHNQLYILVVDNTRATIETIKTQVSTPSPNVYDPSNYVTSKRYTREYKLALIVQLCRIPLTPEVLEHLARIDPSILVDAKLPFVPPVERPDPYAGKKFIEIDLKDKLSSDLSKYDLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2101 | |
| 2 | P | A | 0.4212 | |
| 3 | L | A | 1.3949 | |
| 4 | P | A | 0.7134 | |
| 5 | L | A | 0.8642 | |
| 6 | N | A | -1.0124 | |
| 7 | P | A | -1.7332 | |
| 8 | E | A | -2.5992 | |
| 9 | P | A | -2.2124 | |
| 10 | E | A | -2.1950 | |
| 11 | L | A | -0.8508 | |
| 12 | L | A | -0.2745 | |
| 13 | P | A | -0.7848 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.6342 | |
| 16 | E | A | -2.0756 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -2.0991 | |
| 20 | P | A | -1.4693 | |
| 21 | T | A | -1.2310 | |
| 22 | D | A | -1.5925 | |
| 23 | L | A | -0.3803 | |
| 24 | F | A | 0.0378 | |
| 25 | Y | A | 0.1994 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8564 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.1969 | |
| 31 | L | A | 0.5097 | |
| 32 | I | A | 0.2684 | |
| 33 | T | A | -0.1017 | |
| 34 | E | A | -0.5398 | |
| 35 | T | A | -0.4464 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.5061 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6296 | |
| 40 | K | A | -2.2974 | |
| 41 | D | A | -1.2776 | |
| 42 | I | A | 0.3128 | |
| 43 | V | A | 0.5230 | |
| 44 | E | A | -1.5978 | |
| 45 | N | A | -2.1196 | |
| 46 | G | A | -1.4411 | |
| 47 | K | A | -1.2906 | |
| 48 | V | A | 0.8883 | |
| 49 | V | A | 1.2471 | |
| 50 | I | A | 0.5979 | |
| 51 | P | A | -0.2510 | |
| 52 | R | A | -1.2990 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.4855 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0831 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.1330 | |
| 70 | T | A | -0.4567 | |
| 71 | L | A | -0.1161 | |
| 72 | P | A | -0.3204 | |
| 73 | L | A | -0.3985 | |
| 74 | P | A | -0.6726 | |
| 75 | S | A | -1.5192 | |
| 76 | E | A | -2.8203 | |
| 77 | D | A | -2.8503 | |
| 78 | F | A | -1.4998 | |
| 79 | V | A | -1.6440 | |
| 80 | D | A | -2.2417 | |
| 81 | P | A | -1.3977 | |
| 82 | S | A | -0.9022 | |
| 83 | T | A | -0.8408 | |
| 84 | E | A | -1.1122 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.4260 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.2279 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | K | A | -0.8519 | |
| 95 | I | A | 0.0000 | |
| 96 | E | A | -0.6805 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.2084 | |
| 99 | G | A | -0.2833 | |
| 100 | P | A | -0.2031 | |
| 101 | L | A | -0.0454 | |
| 102 | G | A | -0.4110 | |
| 103 | K | A | -0.6845 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.0746 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8718 | |
| 108 | H | A | 0.0000 | |
| 109 | S | A | -1.7880 | |
| 110 | N | A | -2.6495 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.2601 | |
| 114 | L | A | -0.7339 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -0.8806 | |
| 117 | V | A | -0.3785 | |
| 118 | T | A | -0.9781 | |
| 119 | N | A | -1.5208 | |
| 120 | P | A | -0.9336 | |
| 121 | T | A | -0.5623 | |
| 122 | S | A | -0.3554 | |
| 123 | Y | A | 0.4150 | |
| 124 | Q | A | -0.3684 | |
| 125 | H | A | -0.7548 | |
| 126 | E | A | -1.5531 | |
| 127 | T | A | -1.3111 | |
| 128 | A | A | -1.1157 | |
| 129 | D | A | -2.3649 | |
| 130 | D | A | -1.8625 | |
| 131 | T | A | -1.9466 | |
| 132 | Q | A | -2.4093 | |
| 133 | N | A | -2.2719 | |
| 134 | Y | A | -1.2321 | |
| 135 | S | A | -0.5771 | |
| 136 | W | A | 0.0000 | |
| 137 | Y | A | 0.1906 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | -1.1172 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.1336 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | 0.1312 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.1292 | |
| 155 | Y | A | -0.5399 | |
| 156 | T | A | -1.0420 | |
| 157 | T | A | -0.7794 | |
| 158 | P | A | -0.5842 | |
| 159 | A | A | -0.5318 | |
| 160 | P | A | -0.4789 | |
| 161 | P | A | -0.4629 | |
| 162 | A | A | -0.2540 | |
| 163 | P | A | -0.3841 | |
| 164 | G | A | -0.3487 | |
| 165 | L | A | 0.0791 | |
| 166 | P | A | -0.3118 | |
| 167 | P | A | -0.5100 | |
| 168 | G | A | -0.4121 | |
| 169 | A | A | -0.1798 | |
| 170 | P | A | -0.2280 | |
| 171 | P | A | -0.4022 | |
| 172 | P | A | -0.3418 | |
| 173 | T | A | -0.7050 | |
| 174 | T | A | -0.9902 | |
| 175 | E | A | -1.6411 | |
| 176 | V | A | -0.4132 | |
| 177 | T | A | -0.0027 | |
| 178 | T | A | 0.1919 | |
| 179 | I | A | -0.0019 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.9883 | |
| 182 | H | A | -1.0916 | |
| 183 | G | A | -0.6563 | |
| 184 | D | A | -0.6075 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3848 | |
| 190 | F | A | -0.1507 | |
| 191 | G | A | -0.3454 | |
| 192 | A | A | -0.5856 | |
| 193 | R | A | -1.1598 | |
| 194 | D | A | -1.1696 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.4960 | |
| 197 | A | A | -0.7628 | |
| 198 | L | A | -0.6168 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.6253 | |
| 201 | R | A | -2.4529 | |
| 202 | K | A | -2.6673 | |
| 203 | D | A | 0.0000 | |
| 204 | N | A | -1.2699 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.9513 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2836 | |
| 211 | D | A | -2.6555 | |
| 212 | T | A | -1.5958 | |
| 213 | K | A | -1.3536 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | V | A | 0.5498 | |
| 217 | I | A | 0.0000 | |
| 218 | D | A | -0.6575 | |
| 219 | Y | A | -1.2323 | |
| 220 | D | A | -2.4324 | |
| 221 | G | A | -1.6047 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.5738 | |
| 224 | A | A | -1.5352 | |
| 225 | E | A | -1.3462 | |
| 226 | P | A | -0.8804 | |
| 227 | T | A | -0.4989 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4906 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.9192 | |
| 234 | H | A | -1.0238 | |
| 235 | D | A | -1.5166 | |
| 236 | E | A | -1.8745 | |
| 237 | K | A | -1.9796 | |
| 238 | E | A | -2.0958 | |
| 239 | S | A | -1.4774 | |
| 240 | S | A | -1.2551 | |
| 241 | S | A | -1.3031 | |
| 242 | N | A | -1.8426 | |
| 243 | S | A | -1.2326 | |
| 244 | E | A | -1.3671 | |
| 245 | N | A | -0.9419 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | Y | A | -0.0212 | |
| 249 | C | A | -0.6529 | |
| 250 | G | A | -0.3179 | |
| 251 | P | A | 0.0382 | |
| 252 | D | A | 0.7192 | |
| 253 | L | A | 1.9536 | |
| 254 | I | A | 2.0502 | |
| 255 | P | A | 1.1840 | |
| 256 | P | A | 0.3001 | |
| 257 | P | A | -0.5652 | |
| 258 | N | A | -1.4986 | |
| 259 | E | A | -1.0663 | |
| 260 | P | A | -0.9422 | |
| 261 | P | A | -0.8911 | |
| 262 | P | A | -0.1089 | |
| 263 | S | A | -0.4717 | |
| 264 | K | A | -0.9083 | |
| 265 | L | A | 1.0131 | |
| 266 | Y | A | 1.3670 | |
| 267 | V | A | 1.2170 | |
| 268 | K | A | -0.3995 | |
| 269 | P | A | 0.0482 | |
| 270 | P | A | -0.3781 | |
| 271 | A | A | -0.0174 | |
| 272 | S | A | 0.0189 | |
| 273 | S | A | 0.1630 | |
| 274 | P | A | 0.5490 | |
| 275 | Y | A | 1.1906 | |
| 276 | A | A | 0.8974 | |
| 277 | I | A | 1.8004 | |
| 278 | P | A | 0.6716 | |
| 279 | P | A | 0.0670 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.4614 | |
| 282 | N | A | 0.3024 | |
| 283 | Y | A | 1.1288 | |
| 284 | F | A | 0.3324 | |
| 285 | T | A | -0.4963 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.0390 | |
| 289 | Q | A | 0.0000 | |
| 290 | G | A | -1.3199 | |
| 291 | E | A | -2.0035 | |
| 292 | I | A | -1.4552 | |
| 293 | T | A | -1.9069 | |
| 294 | E | A | -2.7223 | |
| 295 | D | A | -2.9205 | |
| 296 | D | A | -2.2882 | |
| 297 | L | A | -1.4853 | |
| 298 | L | A | -1.2637 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3905 | |
| 301 | K | A | -1.7696 | |
| 302 | P | A | -0.7049 | |
| 303 | I | A | 0.1714 | |
| 304 | F | A | 0.0945 | |
| 305 | L | A | 0.0000 | |
| 306 | T | A | -0.8198 | |
| 307 | K | A | -1.9667 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.1738 | |
| 310 | G | A | -1.2701 | |
| 311 | K | A | -0.9351 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.0530 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.4000 | |
| 319 | N | A | -0.6995 | |
| 320 | Q | A | -0.4544 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | L | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2226 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.5944 | |
| 333 | I | A | -0.8420 | |
| 334 | E | A | -1.7096 | |
| 335 | T | A | -1.0970 | |
| 336 | I | A | -0.1743 | |
| 337 | K | A | -0.9019 | |
| 338 | T | A | 0.0361 | |
| 339 | Q | A | -0.0592 | |
| 340 | V | A | 1.5408 | |
| 341 | S | A | 0.5498 | |
| 342 | T | A | -0.0015 | |
| 343 | P | A | 0.0223 | |
| 344 | S | A | -0.0293 | |
| 345 | P | A | -0.3284 | |
| 346 | N | A | -0.3764 | |
| 347 | V | A | 1.4300 | |
| 348 | Y | A | 1.3116 | |
| 349 | D | A | -0.0139 | |
| 350 | P | A | -0.0925 | |
| 351 | S | A | 0.2056 | |
| 352 | N | A | 0.2953 | |
| 353 | Y | A | 0.8620 | |
| 354 | V | A | 1.6869 | |
| 355 | T | A | 0.1059 | |
| 356 | S | A | -0.5252 | |
| 357 | K | A | -1.6811 | |
| 358 | R | A | -1.2014 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.5509 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1785 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4665 | |
| 365 | L | A | 0.0000 | |
| 366 | A | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.2282 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8816 | |
| 376 | L | A | -0.6268 | |
| 377 | T | A | -0.9612 | |
| 378 | P | A | -1.5444 | |
| 379 | E | A | -2.4784 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -1.3922 | |
| 382 | E | A | -2.5824 | |
| 383 | H | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -1.0195 | |
| 386 | R | A | -1.3432 | |
| 387 | I | A | -0.4945 | |
| 388 | D | A | -0.4561 | |
| 389 | P | A | -0.6886 | |
| 390 | S | A | -0.4185 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.2706 | |
| 393 | V | A | -0.2904 | |
| 394 | D | A | -1.2182 | |
| 395 | A | A | -1.1661 | |
| 396 | K | A | -1.4171 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2281 | |
| 399 | F | A | 1.6698 | |
| 400 | V | A | 0.9144 | |
| 401 | P | A | 0.3193 | |
| 402 | P | A | -0.0900 | |
| 403 | V | A | 0.3245 | |
| 404 | E | A | -1.5442 | |
| 405 | R | A | -1.5333 | |
| 406 | P | A | -1.3396 | |
| 407 | D | A | -1.6681 | |
| 408 | P | A | -0.9608 | |
| 409 | Y | A | -0.8525 | |
| 410 | A | A | -1.0401 | |
| 411 | G | A | -1.3380 | |
| 412 | K | A | -1.8993 | |
| 413 | K | A | -2.4033 | |
| 414 | F | A | -1.3717 | |
| 415 | I | A | -1.0821 | |
| 416 | E | A | -2.2193 | |
| 417 | I | A | -1.8578 | |
| 418 | D | A | -2.9941 | |
| 419 | L | A | 0.0000 | |
| 420 | K | A | -3.1847 | |
| 421 | D | A | -3.0679 | |
| 422 | K | A | -2.2926 | |
| 423 | L | A | -1.0221 | |
| 424 | S | A | -0.7632 | |
| 425 | S | A | -0.5012 | |
| 426 | D | A | -1.3530 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.7803 | |
| 429 | K | A | -2.4760 | |
| 430 | Y | A | -1.7019 | |
| 431 | D | A | -1.8713 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3188 | |
| 435 | L | A | -0.8423 | |
| 436 | Y | A | -0.4192 | |
| 437 | L | A | -0.0628 | |
| 438 | N | A | -1.6676 | |
| 439 | R | A | -1.9588 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine