| Chain sequence(s) |
H: EVKLVESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAYISNGGGNTDYPDTVKGRFTISRDNAKNTLYLQMSRLNSEDTGMYYCARWRSMGDGSFVYATDYWGQGTSVTVSS
L: DVVMTQTPLSLPVSLGDQASISCRSSQSLVHTYGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFILKISRVEAEDLGIYFCSQSTHVPPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2889 | |
| 2 | V | H | -1.5811 | |
| 3 | K | H | -2.0563 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | -0.0144 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5227 | |
| 8 | G | H | -0.7834 | |
| 9 | G | H | -0.3563 | |
| 11 | G | H | 0.3670 | |
| 12 | L | H | 1.1562 | |
| 13 | V | H | 0.0127 | |
| 14 | Q | H | -1.4472 | |
| 15 | P | H | -1.7768 | |
| 16 | G | H | -1.9481 | |
| 17 | G | H | -1.2928 | |
| 18 | S | H | -1.2105 | |
| 19 | L | H | -0.7003 | |
| 20 | K | H | -1.2693 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3500 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.5070 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3878 | |
| 27 | G | H | -1.4266 | |
| 28 | F | H | -1.1009 | |
| 29 | T | H | -1.2689 | |
| 30 | F | H | 0.0000 | |
| 35 | R | H | -3.1321 | |
| 36 | D | H | -2.8149 | |
| 37 | Y | H | -1.3637 | |
| 38 | Y | H | -0.6722 | |
| 39 | M | H | 0.0000 | |
| 40 | Y | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | 0.0000 | |
| 46 | P | H | -1.9642 | |
| 47 | E | H | -2.9630 | |
| 48 | K | H | -2.8293 | |
| 49 | R | H | -2.9462 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8911 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Y | H | -0.1113 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | N | H | -2.0001 | |
| 59 | G | H | -1.9235 | |
| 62 | G | H | -1.3598 | |
| 63 | G | H | -1.3614 | |
| 64 | N | H | -1.6860 | |
| 65 | T | H | -0.8841 | |
| 66 | D | H | -0.8643 | |
| 67 | Y | H | -0.8706 | |
| 68 | P | H | 0.0000 | |
| 69 | D | H | -2.4866 | |
| 70 | T | H | -1.6337 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5345 | |
| 74 | G | H | -1.7908 | |
| 75 | R | H | -1.7597 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7664 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3794 | |
| 80 | R | H | -1.2234 | |
| 81 | D | H | -1.6356 | |
| 82 | N | H | -2.3002 | |
| 83 | A | H | -1.5323 | |
| 84 | K | H | -2.2130 | |
| 85 | N | H | -1.9892 | |
| 86 | T | H | -1.1885 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3212 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8925 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.5510 | |
| 93 | R | H | -2.4558 | |
| 94 | L | H | 0.0000 | |
| 95 | N | H | -2.1931 | |
| 96 | S | H | -1.7267 | |
| 97 | E | H | -2.2335 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6800 | |
| 100 | G | H | -0.9797 | |
| 101 | M | H | -0.1751 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | W | H | 0.0000 | |
| 108 | R | H | -0.1227 | |
| 109 | S | H | -0.5871 | |
| 110 | M | H | -0.5490 | |
| 111 | G | H | -1.4979 | |
| 111A | D | H | -2.0527 | |
| 111B | G | H | -1.2385 | |
| 112B | S | H | -0.5011 | |
| 112A | F | H | -0.0324 | |
| 112 | V | H | 0.0000 | |
| 113 | Y | H | 0.1597 | |
| 114 | A | H | 0.0000 | |
| 115 | T | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.3242 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1849 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1993 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1261 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7601 | |
| 128 | S | H | -0.6743 | |
| 1 | D | L | -1.2380 | |
| 2 | V | L | 0.0000 | |
| 3 | V | L | 0.7728 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.1798 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | 0.1321 | |
| 8 | P | L | 0.4169 | |
| 9 | L | L | 1.2375 | |
| 10 | S | L | 0.1074 | |
| 11 | L | L | -0.2240 | |
| 12 | P | L | -1.0293 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.8011 | |
| 15 | L | L | -0.1058 | |
| 16 | G | L | -1.4199 | |
| 17 | D | L | -1.6354 | |
| 18 | Q | L | -2.1794 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.6413 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.4721 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1138 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9512 | |
| 27 | Q | L | -1.5076 | |
| 28 | S | L | -0.8325 | |
| 29 | L | L | 0.0000 | |
| 30 | V | L | 0.8030 | |
| 31 | H | L | 0.5207 | |
| 32 | T | L | 0.5840 | |
| 34 | Y | L | 1.1494 | |
| 35 | G | L | 0.3703 | |
| 36 | N | L | 0.3036 | |
| 37 | T | L | 0.2226 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -0.9956 | |
| 45 | K | L | -1.3941 | |
| 46 | P | L | -0.8173 | |
| 47 | G | L | -1.1520 | |
| 48 | Q | L | -1.5448 | |
| 49 | S | L | 0.0000 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4459 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4896 | |
| 56 | K | L | -0.5068 | |
| 57 | V | L | -0.4604 | |
| 65 | S | L | -0.7318 | |
| 66 | N | L | -1.1109 | |
| 67 | R | L | -1.5455 | |
| 68 | F | L | -0.7330 | |
| 69 | S | L | -0.5599 | |
| 70 | G | L | -0.7920 | |
| 71 | V | L | -0.9569 | |
| 72 | P | L | -1.2295 | |
| 74 | D | L | -2.3553 | |
| 75 | R | L | -2.0606 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.1086 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.5131 | |
| 80 | G | L | -0.6919 | |
| 83 | S | L | -0.5439 | |
| 84 | G | L | -0.6297 | |
| 85 | T | L | -1.3457 | |
| 86 | D | L | -1.7384 | |
| 87 | F | L | 0.0000 | |
| 88 | I | L | -0.3451 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.3299 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.4322 | |
| 93 | R | L | -2.9162 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6031 | |
| 96 | A | L | -1.0967 | |
| 97 | E | L | -2.0389 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.7374 | |
| 100 | G | L | 0.0000 | |
| 101 | I | L | -0.2826 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.2953 | |
| 108 | T | L | 0.1865 | |
| 109 | H | L | 0.1179 | |
| 114 | V | L | 1.1779 | |
| 115 | P | L | 0.1447 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.2616 | |
| 118 | F | L | 0.0573 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.4709 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6950 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9703 | |
| 126 | L | L | -0.4606 | |
| 127 | K | L | -1.4056 |