| Chain sequence(s) |
A: GPLPLNPEPELKSTDEYVEPTDLLYVAETDLITREGHPFKDVVVNGKVVVPRVSAYQFRVFLLTLPDPNKLPLPSEDFVDFSTEILIWQLKAFYIGVGGPLGKGTVGHPNFNKLGDVENPTEYVHEGADDTVNYSFTPKLKQMYIIGDKPPTGKYIAPAPPAPGLPPGALPPTKEVTTIIQDGDMADIGFGAKDFKALLPRKDDVPDIIRDTTTKVPDIEGMKAEPYGTRMFTYDRKESSKDVEKFVRSGPDLIPLPDAPPPSPLYVKPPPSSPYAVRPSYNYFTLPDRGEITEADLLFNKPIVLEKTSGKNNGVLWHNRLYVTVLDNTRDEIEVIKTRKSTPLPDVYDPSNYETSLRYKEEYQLSLIVQLCKIPLTPETLAFLERLDPSILVDANLPDIPPVEREDPYAGLKFIELDLTNKLTSNLSNYPLGRWYLNQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2091 | |
| 2 | P | A | 0.4245 | |
| 3 | L | A | 1.3982 | |
| 4 | P | A | 0.7095 | |
| 5 | L | A | 0.8808 | |
| 6 | N | A | -1.0299 | |
| 7 | P | A | -1.7847 | |
| 8 | E | A | -2.5795 | |
| 9 | P | A | -2.2134 | |
| 10 | E | A | -2.3956 | |
| 11 | L | A | -1.1366 | |
| 12 | K | A | -1.9120 | |
| 13 | S | A | -2.0850 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.4654 | |
| 16 | E | A | -3.1906 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.2066 | |
| 20 | P | A | -1.5547 | |
| 21 | T | A | -1.2007 | |
| 22 | D | A | -1.6148 | |
| 23 | L | A | -0.4962 | |
| 24 | L | A | -0.2240 | |
| 25 | Y | A | -0.1738 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.7090 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.1981 | |
| 31 | L | A | 0.4919 | |
| 32 | I | A | 0.1921 | |
| 33 | T | A | -0.7931 | |
| 34 | R | A | -1.7173 | |
| 35 | E | A | -2.5585 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.4071 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.9234 | |
| 40 | K | A | -1.8369 | |
| 41 | D | A | -0.7178 | |
| 42 | V | A | 1.2676 | |
| 43 | V | A | 2.2502 | |
| 44 | V | A | 1.7600 | |
| 45 | N | A | -0.4847 | |
| 46 | G | A | -0.3349 | |
| 47 | K | A | -0.0994 | |
| 48 | V | A | 1.9574 | |
| 49 | V | A | 2.5266 | |
| 50 | V | A | 0.9564 | |
| 51 | P | A | -0.3029 | |
| 52 | R | A | -1.2418 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2014 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0485 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2176 | |
| 70 | K | A | -1.8831 | |
| 71 | L | A | -0.6909 | |
| 72 | P | A | -0.6010 | |
| 73 | L | A | -0.6469 | |
| 74 | P | A | -0.6773 | |
| 75 | S | A | -1.5516 | |
| 76 | E | A | -2.8814 | |
| 77 | D | A | -2.8125 | |
| 78 | F | A | -1.4468 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -1.8851 | |
| 81 | F | A | -0.3243 | |
| 82 | S | A | -0.3556 | |
| 83 | T | A | -0.4433 | |
| 84 | E | A | -0.5396 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.5712 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.2553 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -0.4831 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.5232 | |
| 99 | G | A | -0.9282 | |
| 100 | P | A | -0.6129 | |
| 101 | L | A | -0.4370 | |
| 102 | G | A | -1.1659 | |
| 103 | K | A | -1.8349 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5576 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.7411 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.3679 | |
| 110 | N | A | -2.1072 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | K | A | -0.8634 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6465 | |
| 117 | V | A | -1.0032 | |
| 118 | E | A | -1.9380 | |
| 119 | N | A | -2.3219 | |
| 120 | P | A | -1.7129 | |
| 121 | T | A | -1.3640 | |
| 122 | E | A | -1.7847 | |
| 123 | Y | A | -0.0661 | |
| 124 | V | A | -0.5174 | |
| 125 | H | A | -0.7884 | |
| 126 | E | A | -1.7410 | |
| 127 | G | A | -1.6767 | |
| 128 | A | A | -1.3294 | |
| 129 | D | A | -2.3338 | |
| 130 | D | A | -1.7117 | |
| 131 | T | A | -1.2948 | |
| 132 | V | A | -0.8239 | |
| 133 | N | A | -1.4840 | |
| 134 | Y | A | -0.7154 | |
| 135 | S | A | -0.4743 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.3705 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.2927 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | M | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | K | A | -0.7779 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.2447 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.7736 | |
| 155 | Y | A | -0.7867 | |
| 156 | I | A | -0.8466 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.7717 | |
| 159 | A | A | -0.8596 | |
| 160 | P | A | -0.6349 | |
| 161 | P | A | -0.2447 | |
| 162 | A | A | -0.2238 | |
| 163 | P | A | -0.3601 | |
| 164 | G | A | -0.3283 | |
| 165 | L | A | 0.3723 | |
| 166 | P | A | -0.1183 | |
| 167 | P | A | -0.2860 | |
| 168 | G | A | 0.0657 | |
| 169 | A | A | 0.9763 | |
| 170 | L | A | 1.8737 | |
| 171 | P | A | 0.4191 | |
| 172 | P | A | -0.1513 | |
| 173 | T | A | -0.9127 | |
| 174 | K | A | -2.0055 | |
| 175 | E | A | -2.2434 | |
| 176 | V | A | -1.0547 | |
| 177 | T | A | -0.5611 | |
| 178 | T | A | -0.0297 | |
| 179 | I | A | -0.1044 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7441 | |
| 182 | D | A | -0.9679 | |
| 183 | G | A | -0.6902 | |
| 184 | D | A | -0.6537 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6605 | |
| 190 | F | A | -0.0992 | |
| 191 | G | A | -0.2002 | |
| 192 | A | A | -0.4721 | |
| 193 | K | A | -1.1097 | |
| 194 | D | A | -1.1010 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.6924 | |
| 197 | A | A | -1.2146 | |
| 198 | L | A | -0.7856 | |
| 199 | L | A | -1.3154 | |
| 200 | P | A | -1.6711 | |
| 201 | R | A | -2.1839 | |
| 202 | K | A | -2.8179 | |
| 203 | D | A | 0.0000 | |
| 204 | D | A | -1.2123 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6831 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2522 | |
| 211 | D | A | -2.2726 | |
| 212 | T | A | -1.4378 | |
| 213 | T | A | -0.9766 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0747 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.1196 | |
| 219 | I | A | 0.0000 | |
| 220 | E | A | -2.5237 | |
| 221 | G | A | -1.8165 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.3433 | |
| 224 | A | A | -1.4858 | |
| 225 | E | A | -1.3627 | |
| 226 | P | A | -0.9826 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | T | A | 0.0000 | |
| 230 | R | A | -0.8555 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.3784 | |
| 234 | Y | A | -0.4990 | |
| 235 | D | A | -1.6653 | |
| 236 | R | A | -2.9120 | |
| 237 | K | A | -2.7831 | |
| 238 | E | A | -2.7297 | |
| 239 | S | A | -1.8918 | |
| 240 | S | A | -1.9319 | |
| 241 | K | A | -2.6025 | |
| 242 | D | A | -2.5481 | |
| 243 | V | A | -0.9162 | |
| 244 | E | A | -1.5988 | |
| 245 | K | A | -1.6765 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.4233 | |
| 249 | S | A | -0.9672 | |
| 250 | G | A | -0.6611 | |
| 251 | P | A | -0.0099 | |
| 252 | D | A | 0.8892 | |
| 253 | L | A | 2.4014 | |
| 254 | I | A | 2.7668 | |
| 255 | P | A | 0.8897 | |
| 256 | L | A | 0.7158 | |
| 257 | P | A | -0.4470 | |
| 258 | D | A | -1.9193 | |
| 259 | A | A | -0.9140 | |
| 260 | P | A | -0.9935 | |
| 261 | P | A | -0.6252 | |
| 262 | P | A | -0.1955 | |
| 263 | S | A | -0.0987 | |
| 264 | P | A | 0.6640 | |
| 265 | L | A | 1.4192 | |
| 266 | Y | A | 1.1333 | |
| 267 | V | A | 1.1374 | |
| 268 | K | A | -0.9719 | |
| 269 | P | A | -0.1892 | |
| 270 | P | A | -0.5387 | |
| 271 | P | A | -0.3447 | |
| 272 | S | A | -0.1376 | |
| 273 | S | A | 0.0571 | |
| 274 | P | A | 0.5337 | |
| 275 | Y | A | 1.1011 | |
| 276 | A | A | 0.6152 | |
| 277 | V | A | 1.5879 | |
| 278 | R | A | 0.3819 | |
| 279 | P | A | 0.0179 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.3467 | |
| 282 | N | A | 0.2273 | |
| 283 | Y | A | 0.9315 | |
| 284 | F | A | 0.1986 | |
| 285 | T | A | -0.7228 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.5268 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.6913 | |
| 291 | E | A | -2.0361 | |
| 292 | I | A | -1.3189 | |
| 293 | T | A | -1.4015 | |
| 294 | E | A | -1.9140 | |
| 295 | A | A | -1.2303 | |
| 296 | D | A | -1.7043 | |
| 297 | L | A | -1.0922 | |
| 298 | L | A | -1.2677 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2632 | |
| 301 | K | A | -1.6139 | |
| 302 | P | A | -0.4903 | |
| 303 | I | A | 0.0543 | |
| 304 | V | A | 0.0503 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.4857 | |
| 307 | K | A | -2.9309 | |
| 308 | T | A | 0.0000 | |
| 309 | S | A | -1.1044 | |
| 310 | G | A | -1.3654 | |
| 311 | K | A | -1.9186 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.6922 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.5834 | |
| 319 | N | A | -0.5655 | |
| 320 | R | A | -0.7589 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.9031 | |
| 331 | D | A | 0.0000 | |
| 332 | E | A | -1.9361 | |
| 333 | I | A | -0.9004 | |
| 334 | E | A | -0.8043 | |
| 335 | V | A | 1.0781 | |
| 336 | I | A | 0.3553 | |
| 337 | K | A | -2.1429 | |
| 338 | T | A | -2.4401 | |
| 339 | R | A | -3.5208 | |
| 340 | K | A | -3.2206 | |
| 341 | S | A | -1.4668 | |
| 342 | T | A | -0.7795 | |
| 343 | P | A | -0.6394 | |
| 344 | L | A | -0.1033 | |
| 345 | P | A | -0.0066 | |
| 346 | D | A | -0.6378 | |
| 347 | V | A | 1.3652 | |
| 348 | Y | A | 1.3232 | |
| 349 | D | A | -0.1378 | |
| 350 | P | A | -0.7473 | |
| 351 | S | A | -1.2781 | |
| 352 | N | A | -1.9061 | |
| 353 | Y | A | -2.4982 | |
| 354 | E | A | -3.1051 | |
| 355 | T | A | -1.1361 | |
| 356 | S | A | -0.2732 | |
| 357 | L | A | 0.4448 | |
| 358 | R | A | -0.7840 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.5035 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.7420 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4537 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3705 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -1.0404 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6503 | |
| 376 | L | A | -0.1509 | |
| 377 | T | A | -0.6252 | |
| 378 | P | A | -0.9578 | |
| 379 | E | A | -1.7742 | |
| 380 | T | A | -1.4121 | |
| 381 | L | A | -0.8889 | |
| 382 | A | A | -1.4670 | |
| 383 | F | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.6713 | |
| 386 | R | A | -2.6586 | |
| 387 | L | A | -1.2616 | |
| 388 | D | A | -1.4774 | |
| 389 | P | A | -1.5758 | |
| 390 | S | A | -1.0752 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.8052 | |
| 394 | D | A | -1.0616 | |
| 395 | A | A | -0.9940 | |
| 396 | N | A | -1.5314 | |
| 397 | L | A | -0.9876 | |
| 398 | P | A | -1.1613 | |
| 399 | D | A | -1.8621 | |
| 400 | I | A | -0.5716 | |
| 401 | P | A | -0.4469 | |
| 402 | P | A | -0.4201 | |
| 403 | V | A | 0.2402 | |
| 404 | E | A | -1.8625 | |
| 405 | R | A | -2.1043 | |
| 406 | E | A | -2.6194 | |
| 407 | D | A | -1.8427 | |
| 408 | P | A | -0.9988 | |
| 409 | Y | A | -0.6098 | |
| 410 | A | A | -0.8002 | |
| 411 | G | A | -0.6301 | |
| 412 | L | A | -0.5658 | |
| 413 | K | A | -1.7875 | |
| 414 | F | A | -1.0626 | |
| 415 | I | A | -1.0795 | |
| 416 | E | A | -2.2088 | |
| 417 | L | A | -1.6879 | |
| 418 | D | A | -2.4563 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3462 | |
| 421 | N | A | -1.7887 | |
| 422 | K | A | -1.5704 | |
| 423 | L | A | -0.5956 | |
| 424 | T | A | -0.7811 | |
| 425 | S | A | -0.7495 | |
| 426 | N | A | -1.7848 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.4636 | |
| 429 | N | A | -1.9331 | |
| 430 | Y | A | -1.0809 | |
| 431 | P | A | -0.7813 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5081 | |
| 435 | W | A | -0.5279 | |
| 436 | Y | A | -0.0080 | |
| 437 | L | A | 0.2858 | |
| 438 | N | A | -1.2848 | |
| 439 | Q | A | -1.3562 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine