| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGDSSFDFSQYSLGWFRQAPGQGLEAVAAISADGSQTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASKSTQLKNILPESFDYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5727 | |
| 2 | V | H | -1.1357 | |
| 3 | Q | H | -0.7625 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1479 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1886 | |
| 8 | G | H | -0.7307 | |
| 9 | G | H | 0.1776 | |
| 10 | G | H | 0.7503 | |
| 11 | L | H | 1.4414 | |
| 12 | V | H | -0.0694 | |
| 13 | Q | H | -1.4157 | |
| 14 | P | H | -1.8777 | |
| 15 | G | H | -1.6970 | |
| 16 | G | H | -1.2032 | |
| 17 | S | H | -1.4287 | |
| 18 | L | H | -1.0187 | |
| 19 | R | H | -2.2271 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4459 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1601 | |
| 24 | A | H | -0.4776 | |
| 25 | S | H | -0.9762 | |
| 26 | G | H | -1.3939 | |
| 27 | D | H | -1.7920 | |
| 28 | S | H | -1.0363 | |
| 29 | S | H | -0.6942 | |
| 30 | F | H | -0.7508 | |
| 31 | D | H | -1.5206 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -2.1201 | |
| 34 | Q | H | -2.2900 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | 0.0000 | |
| 42 | Q | H | -0.7157 | |
| 43 | A | H | -0.9900 | |
| 44 | P | H | -0.9779 | |
| 45 | G | H | -1.2998 | |
| 46 | Q | H | -1.8473 | |
| 47 | G | H | -1.2534 | |
| 48 | L | H | -0.4102 | |
| 49 | E | H | -0.7477 | |
| 50 | A | H | -0.1918 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | S | H | -1.7117 | |
| 56 | A | H | -2.1878 | |
| 57 | D | H | -2.6771 | |
| 58 | G | H | -1.8816 | |
| 59 | S | H | -1.4935 | |
| 60 | Q | H | -2.0095 | |
| 61 | T | H | -0.8599 | |
| 62 | Y | H | 0.0000 | |
| 63 | Y | H | -0.7328 | |
| 64 | A | H | -1.3451 | |
| 65 | D | H | -2.4537 | |
| 66 | S | H | -1.7666 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.5894 | |
| 69 | G | H | -1.8664 | |
| 70 | R | H | -1.8629 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.0853 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.6724 | |
| 75 | R | H | -1.6085 | |
| 76 | D | H | -2.4375 | |
| 77 | N | H | -3.1343 | |
| 78 | S | H | -2.1100 | |
| 79 | K | H | -2.7973 | |
| 80 | N | H | -2.3572 | |
| 81 | T | H | -1.3794 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.6954 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -2.2741 | |
| 88 | S | H | -1.7327 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -3.0199 | |
| 91 | A | H | -2.0327 | |
| 92 | E | H | -2.4587 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.5169 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.7995 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.3328 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | S | H | 0.0000 | |
| 103 | K | H | -2.6608 | |
| 104 | S | H | -1.7572 | |
| 105 | T | H | -1.8936 | |
| 106 | Q | H | -2.2078 | |
| 107 | L | H | -1.8247 | |
| 108 | K | H | -2.5882 | |
| 109 | N | H | -2.2190 | |
| 110 | I | H | -1.0739 | |
| 111 | L | H | -0.5658 | |
| 112 | P | H | -0.9371 | |
| 113 | E | H | -2.0694 | |
| 114 | S | H | -1.6531 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -2.2240 | |
| 117 | Y | H | -0.9174 | |
| 118 | W | H | -0.0463 | |
| 119 | G | H | -0.0016 | |
| 120 | Q | H | -0.6595 | |
| 121 | G | H | 0.1049 | |
| 122 | T | H | 0.6420 | |
| 123 | L | H | 1.6185 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3046 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8650 |