Project name: 434f4d86bfbca54

Status: done

Started: 2024-12-20 12:03:17
Settings
Chain sequence(s) A: QSVLTQPPSVSAAPGQKVTISCSGNNSNIGKNYVSWYQQLPGRTPKLIMYENNKRSSGIPDRFSGSKSGNSATLTITGLQTGDEADYYCGVWDSSLSGGVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:56)
Show buried residues

Minimal score value
-3.3025
Maximal score value
1.3589
Average score
-0.8394
Total score value
-180.4766

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -0.8693
2 S A 0.0294
3 V A 0.9077
4 L A 0.0000
5 T A 0.1337
6 Q A 0.0000
7 P A -0.4946
8 P A -0.6773
9 S A -0.5205
11 V A -0.3065
12 S A -0.6797
13 A A 0.0000
14 A A -1.0160
15 P A -1.4691
16 G A -1.8061
17 Q A -2.4205
18 K A -2.5845
19 V A 0.0000
20 T A -0.4421
21 I A 0.0000
22 S A -0.2368
23 C A 0.0000
24 S A -0.5479
25 G A -0.6114
26 N A -1.5905
27 N A -2.5340
28 S A -1.3222
29 N A 0.0000
30 I A 0.0000
35 G A -2.4371
36 K A -2.2421
37 N A -0.9300
38 Y A -0.3210
39 V A 0.0000
40 S A -0.2380
41 W A 0.0000
42 Y A -0.0005
43 Q A 0.0000
44 Q A -1.7377
45 L A -1.5825
46 P A -1.3556
47 G A -1.5521
48 R A -2.4503
49 T A -1.5181
50 P A -1.3834
51 K A -1.3000
52 L A -0.1366
53 I A 0.0000
54 M A 0.0000
55 Y A -1.2821
56 E A -2.3397
57 N A -2.0605
65 N A -2.8316
66 K A -3.0161
67 R A -2.4690
68 S A -1.0742
69 S A -0.7277
70 G A -0.8339
71 I A -0.9247
72 P A -1.2913
74 D A -2.2127
75 R A -1.5345
76 F A 0.0000
77 S A -1.4607
78 G A -1.5680
79 S A -1.3873
80 K A -1.4595
83 S A -1.0537
84 G A -1.7875
85 N A -2.3212
86 S A -1.2801
87 A A 0.0000
88 T A -0.5469
89 L A 0.0000
90 T A -0.5476
91 I A 0.0000
92 T A -1.8387
93 G A -1.5972
94 L A 0.0000
95 Q A -1.8547
96 T A -1.0824
97 G A -0.9880
98 D A 0.0000
99 E A -1.2739
100 A A 0.0000
101 D A -1.4422
102 Y A 0.0000
103 Y A 0.0779
104 C A 0.0000
105 G A 0.0000
106 V A 0.0000
107 W A 0.9482
108 D A 0.0000
109 S A -0.3842
110 S A -0.0620
113 L A 0.2561
114 S A 0.0118
115 G A -0.2228
116 G A 0.0756
117 V A 0.0000
118 F A 1.1853
119 G A 0.4755
120 G A -0.2338
121 G A -0.5102
122 T A 0.0000
123 K A -0.9652
124 V A 0.0000
125 T A 0.0000
126 V A 0.0000
127 L A -0.7185
128 G A -0.7488
129 Q A -1.0824
130 P A -1.2479
131 K A -2.0775
132 A A -1.2023
133 A A -0.6393
134 P A -0.3898
135 S A -0.2205
136 V A 0.0000
137 T A 0.4442
138 L A 0.6313
139 F A 1.3589
140 P A 0.4160
141 P A 0.0000
142 S A -1.0515
143 S A -1.8886
144 E A -2.7657
145 E A -2.3122
146 L A -2.0113
147 Q A -2.5088
148 A A -2.0894
149 N A -2.8378
150 K A -2.9754
151 A A 0.0000
152 T A -0.1438
153 L A 0.0000
154 V A 1.0233
155 C A 0.0000
156 L A 1.2269
157 I A 0.0000
158 S A -0.6411
159 D A -1.8777
160 F A 0.0000
161 Y A 0.0000
162 P A 0.0000
163 G A -0.7628
164 A A -0.1140
165 V A 0.0681
166 T A 0.0309
167 V A 0.0634
168 A A -0.3487
169 W A 0.0000
170 K A -1.1069
171 A A 0.0000
172 D A -1.2849
173 S A -0.8826
174 S A -0.8198
175 P A -0.8791
176 V A -0.7627
177 K A -1.5864
178 A A -0.9269
179 G A -0.7219
180 V A -0.5040
181 E A -1.4097
182 T A -0.4717
183 T A -0.4891
184 T A -0.3200
185 P A -0.6272
186 S A -1.4320
187 K A -3.0069
188 Q A -2.8580
189 S A -2.0524
190 N A -2.7437
191 N A -3.0382
192 K A -2.6289
193 Y A -1.7697
194 A A -0.8889
195 A A 0.0000
196 S A 0.2686
197 S A 0.0000
198 Y A 0.4944
199 L A 0.0000
200 S A -0.5716
201 L A -1.1308
202 T A -1.9250
203 P A 0.0000
204 E A -3.3025
205 Q A -2.4275
206 W A 0.0000
207 K A -3.2057
208 S A -2.4872
209 H A -2.4376
210 R A -2.5164
211 S A -1.5016
212 Y A 0.0000
213 S A -1.0073
214 C A 0.0000
215 Q A -1.0730
216 V A 0.0000
217 T A -0.4040
218 H A 0.0000
219 E A -1.0604
220 G A -0.8599
221 S A -0.5168
222 T A -0.4945
223 V A -0.6099
224 E A -2.0554
225 K A -1.5800
226 T A -0.7734
227 V A -0.0905
228 A A -0.8652
229 P A -1.3367
230 T A -0.9968
231 E A -1.5407
232 C A -0.1862
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Laboratory of Theory of Biopolymers 2018