| Chain sequence(s) |
A: QSVLTQPPSVSAAPGQKVTISCSGNNSNIGKNYVSWYQQLPGRTPKLIMYENNKRSSGIPDRFSGSKSGNSATLTITGLQTGDEADYYCGVWDSSLSGGVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -0.8693 | |
| 2 | S | A | 0.0294 | |
| 3 | V | A | 0.9077 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | 0.1337 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -0.4946 | |
| 8 | P | A | -0.6773 | |
| 9 | S | A | -0.5205 | |
| 11 | V | A | -0.3065 | |
| 12 | S | A | -0.6797 | |
| 13 | A | A | 0.0000 | |
| 14 | A | A | -1.0160 | |
| 15 | P | A | -1.4691 | |
| 16 | G | A | -1.8061 | |
| 17 | Q | A | -2.4205 | |
| 18 | K | A | -2.5845 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.4421 | |
| 21 | I | A | 0.0000 | |
| 22 | S | A | -0.2368 | |
| 23 | C | A | 0.0000 | |
| 24 | S | A | -0.5479 | |
| 25 | G | A | -0.6114 | |
| 26 | N | A | -1.5905 | |
| 27 | N | A | -2.5340 | |
| 28 | S | A | -1.3222 | |
| 29 | N | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 35 | G | A | -2.4371 | |
| 36 | K | A | -2.2421 | |
| 37 | N | A | -0.9300 | |
| 38 | Y | A | -0.3210 | |
| 39 | V | A | 0.0000 | |
| 40 | S | A | -0.2380 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.0005 | |
| 43 | Q | A | 0.0000 | |
| 44 | Q | A | -1.7377 | |
| 45 | L | A | -1.5825 | |
| 46 | P | A | -1.3556 | |
| 47 | G | A | -1.5521 | |
| 48 | R | A | -2.4503 | |
| 49 | T | A | -1.5181 | |
| 50 | P | A | -1.3834 | |
| 51 | K | A | -1.3000 | |
| 52 | L | A | -0.1366 | |
| 53 | I | A | 0.0000 | |
| 54 | M | A | 0.0000 | |
| 55 | Y | A | -1.2821 | |
| 56 | E | A | -2.3397 | |
| 57 | N | A | -2.0605 | |
| 65 | N | A | -2.8316 | |
| 66 | K | A | -3.0161 | |
| 67 | R | A | -2.4690 | |
| 68 | S | A | -1.0742 | |
| 69 | S | A | -0.7277 | |
| 70 | G | A | -0.8339 | |
| 71 | I | A | -0.9247 | |
| 72 | P | A | -1.2913 | |
| 74 | D | A | -2.2127 | |
| 75 | R | A | -1.5345 | |
| 76 | F | A | 0.0000 | |
| 77 | S | A | -1.4607 | |
| 78 | G | A | -1.5680 | |
| 79 | S | A | -1.3873 | |
| 80 | K | A | -1.4595 | |
| 83 | S | A | -1.0537 | |
| 84 | G | A | -1.7875 | |
| 85 | N | A | -2.3212 | |
| 86 | S | A | -1.2801 | |
| 87 | A | A | 0.0000 | |
| 88 | T | A | -0.5469 | |
| 89 | L | A | 0.0000 | |
| 90 | T | A | -0.5476 | |
| 91 | I | A | 0.0000 | |
| 92 | T | A | -1.8387 | |
| 93 | G | A | -1.5972 | |
| 94 | L | A | 0.0000 | |
| 95 | Q | A | -1.8547 | |
| 96 | T | A | -1.0824 | |
| 97 | G | A | -0.9880 | |
| 98 | D | A | 0.0000 | |
| 99 | E | A | -1.2739 | |
| 100 | A | A | 0.0000 | |
| 101 | D | A | -1.4422 | |
| 102 | Y | A | 0.0000 | |
| 103 | Y | A | 0.0779 | |
| 104 | C | A | 0.0000 | |
| 105 | G | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | W | A | 0.9482 | |
| 108 | D | A | 0.0000 | |
| 109 | S | A | -0.3842 | |
| 110 | S | A | -0.0620 | |
| 113 | L | A | 0.2561 | |
| 114 | S | A | 0.0118 | |
| 115 | G | A | -0.2228 | |
| 116 | G | A | 0.0756 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | 1.1853 | |
| 119 | G | A | 0.4755 | |
| 120 | G | A | -0.2338 | |
| 121 | G | A | -0.5102 | |
| 122 | T | A | 0.0000 | |
| 123 | K | A | -0.9652 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.0000 | |
| 126 | V | A | 0.0000 | |
| 127 | L | A | -0.7185 | |
| 128 | G | A | -0.7488 | |
| 129 | Q | A | -1.0824 | |
| 130 | P | A | -1.2479 | |
| 131 | K | A | -2.0775 | |
| 132 | A | A | -1.2023 | |
| 133 | A | A | -0.6393 | |
| 134 | P | A | -0.3898 | |
| 135 | S | A | -0.2205 | |
| 136 | V | A | 0.0000 | |
| 137 | T | A | 0.4442 | |
| 138 | L | A | 0.6313 | |
| 139 | F | A | 1.3589 | |
| 140 | P | A | 0.4160 | |
| 141 | P | A | 0.0000 | |
| 142 | S | A | -1.0515 | |
| 143 | S | A | -1.8886 | |
| 144 | E | A | -2.7657 | |
| 145 | E | A | -2.3122 | |
| 146 | L | A | -2.0113 | |
| 147 | Q | A | -2.5088 | |
| 148 | A | A | -2.0894 | |
| 149 | N | A | -2.8378 | |
| 150 | K | A | -2.9754 | |
| 151 | A | A | 0.0000 | |
| 152 | T | A | -0.1438 | |
| 153 | L | A | 0.0000 | |
| 154 | V | A | 1.0233 | |
| 155 | C | A | 0.0000 | |
| 156 | L | A | 1.2269 | |
| 157 | I | A | 0.0000 | |
| 158 | S | A | -0.6411 | |
| 159 | D | A | -1.8777 | |
| 160 | F | A | 0.0000 | |
| 161 | Y | A | 0.0000 | |
| 162 | P | A | 0.0000 | |
| 163 | G | A | -0.7628 | |
| 164 | A | A | -0.1140 | |
| 165 | V | A | 0.0681 | |
| 166 | T | A | 0.0309 | |
| 167 | V | A | 0.0634 | |
| 168 | A | A | -0.3487 | |
| 169 | W | A | 0.0000 | |
| 170 | K | A | -1.1069 | |
| 171 | A | A | 0.0000 | |
| 172 | D | A | -1.2849 | |
| 173 | S | A | -0.8826 | |
| 174 | S | A | -0.8198 | |
| 175 | P | A | -0.8791 | |
| 176 | V | A | -0.7627 | |
| 177 | K | A | -1.5864 | |
| 178 | A | A | -0.9269 | |
| 179 | G | A | -0.7219 | |
| 180 | V | A | -0.5040 | |
| 181 | E | A | -1.4097 | |
| 182 | T | A | -0.4717 | |
| 183 | T | A | -0.4891 | |
| 184 | T | A | -0.3200 | |
| 185 | P | A | -0.6272 | |
| 186 | S | A | -1.4320 | |
| 187 | K | A | -3.0069 | |
| 188 | Q | A | -2.8580 | |
| 189 | S | A | -2.0524 | |
| 190 | N | A | -2.7437 | |
| 191 | N | A | -3.0382 | |
| 192 | K | A | -2.6289 | |
| 193 | Y | A | -1.7697 | |
| 194 | A | A | -0.8889 | |
| 195 | A | A | 0.0000 | |
| 196 | S | A | 0.2686 | |
| 197 | S | A | 0.0000 | |
| 198 | Y | A | 0.4944 | |
| 199 | L | A | 0.0000 | |
| 200 | S | A | -0.5716 | |
| 201 | L | A | -1.1308 | |
| 202 | T | A | -1.9250 | |
| 203 | P | A | 0.0000 | |
| 204 | E | A | -3.3025 | |
| 205 | Q | A | -2.4275 | |
| 206 | W | A | 0.0000 | |
| 207 | K | A | -3.2057 | |
| 208 | S | A | -2.4872 | |
| 209 | H | A | -2.4376 | |
| 210 | R | A | -2.5164 | |
| 211 | S | A | -1.5016 | |
| 212 | Y | A | 0.0000 | |
| 213 | S | A | -1.0073 | |
| 214 | C | A | 0.0000 | |
| 215 | Q | A | -1.0730 | |
| 216 | V | A | 0.0000 | |
| 217 | T | A | -0.4040 | |
| 218 | H | A | 0.0000 | |
| 219 | E | A | -1.0604 | |
| 220 | G | A | -0.8599 | |
| 221 | S | A | -0.5168 | |
| 222 | T | A | -0.4945 | |
| 223 | V | A | -0.6099 | |
| 224 | E | A | -2.0554 | |
| 225 | K | A | -1.5800 | |
| 226 | T | A | -0.7734 | |
| 227 | V | A | -0.0905 | |
| 228 | A | A | -0.8652 | |
| 229 | P | A | -1.3367 | |
| 230 | T | A | -0.9968 | |
| 231 | E | A | -1.5407 | |
| 232 | C | A | -0.1862 |