| Chain sequence(s) |
A: KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KR1A,VN3A,KR2A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.14188 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:56)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:31)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -3.6097 | mutated: KR1A |
| 2 | R | A | -3.8706 | mutated: KR2A |
| 3 | N | A | -2.8789 | mutated: VN3A |
| 4 | V | A | -1.7340 | |
| 5 | L | A | 0.0000 | |
| 6 | G | A | 0.0000 | |
| 7 | K | A | -2.4175 | |
| 8 | K | A | -3.5017 | |
| 9 | G | A | -3.0365 | |
| 10 | D | A | -3.3715 | |
| 11 | T | A | -2.4483 | |
| 12 | V | A | -1.5617 | |
| 13 | E | A | -1.8760 | |
| 14 | L | A | 0.0000 | |
| 15 | T | A | -1.0580 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | -0.7113 | |
| 18 | A | A | -2.1441 | |
| 19 | S | A | -1.7912 | |
| 20 | Q | A | -2.9236 | |
| 21 | K | A | -3.3235 | |
| 22 | K | A | -3.7038 | |
| 23 | S | A | -2.8699 | |
| 24 | I | A | -2.1011 | |
| 25 | Q | A | -2.1790 | |
| 26 | F | A | 0.0000 | |
| 27 | H | A | -1.3472 | |
| 28 | W | A | 0.0000 | |
| 29 | K | A | -1.3527 | |
| 30 | N | A | -1.4075 | |
| 31 | S | A | -1.5801 | |
| 32 | N | A | -1.8552 | |
| 33 | Q | A | -1.6423 | |
| 34 | I | A | -0.3768 | |
| 35 | K | A | -1.1856 | |
| 36 | I | A | 0.0000 | |
| 37 | L | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | N | A | -0.8735 | |
| 40 | Q | A | -1.1566 | |
| 41 | G | A | -0.8188 | |
| 42 | S | A | -0.1857 | |
| 43 | F | A | 1.0518 | |
| 44 | L | A | -0.1614 | |
| 45 | T | A | -0.5092 | |
| 46 | K | A | -1.4045 | |
| 47 | G | A | -1.0546 | |
| 48 | P | A | -1.1643 | |
| 49 | S | A | -1.4302 | |
| 50 | K | A | -2.2261 | |
| 51 | L | A | 0.0000 | |
| 52 | N | A | -2.0799 | |
| 53 | D | A | -2.6402 | |
| 54 | R | A | -2.1291 | |
| 55 | A | A | 0.0000 | |
| 56 | D | A | -1.8109 | |
| 57 | S | A | 0.0000 | |
| 58 | R | A | -2.5616 | |
| 59 | R | A | -2.7372 | |
| 60 | S | A | -2.0519 | |
| 61 | L | A | -2.0019 | |
| 62 | W | A | -2.3369 | |
| 63 | D | A | -3.3544 | |
| 64 | Q | A | -3.0244 | |
| 65 | G | A | 0.0000 | |
| 66 | N | A | -1.5263 | |
| 67 | F | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | L | A | 0.0000 | |
| 70 | I | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | K | A | -2.8311 | |
| 73 | N | A | -2.9993 | |
| 74 | L | A | 0.0000 | |
| 75 | K | A | -2.3586 | |
| 76 | I | A | -1.4606 | |
| 77 | E | A | -1.3462 | |
| 78 | D | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | D | A | -1.0226 | |
| 81 | T | A | -1.5713 | |
| 82 | Y | A | 0.0000 | |
| 83 | I | A | -2.0980 | |
| 84 | C | A | 0.0000 | |
| 85 | E | A | -3.2353 | |
| 86 | V | A | 0.0000 | |
| 87 | E | A | -3.6370 | |
| 88 | D | A | -3.7512 | |
| 89 | Q | A | -3.6156 | |
| 90 | K | A | -3.9479 | |
| 91 | E | A | -3.5891 | |
| 92 | E | A | -3.8198 | |
| 93 | V | A | 0.0000 | |
| 94 | Q | A | -2.0086 | |
| 95 | L | A | 0.0000 | |
| 96 | L | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | L | A | -1.2584 | |
| 101 | T | A | -0.9997 | |
| 102 | A | A | -1.5619 | |
| 103 | N | A | -1.9285 | |
| 104 | S | A | -1.8334 | |
| 105 | D | A | -2.4230 | |
| 106 | T | A | -1.8507 | |
| 107 | H | A | -1.1840 | |
| 108 | L | A | 0.2498 | |
| 109 | L | A | 1.1596 | |
| 110 | Q | A | -0.1265 | |
| 111 | G | A | -1.1482 | |
| 112 | Q | A | -1.7653 | |
| 113 | S | A | -1.0089 | |
| 114 | L | A | 0.0000 | |
| 115 | T | A | -0.8320 | |
| 116 | L | A | 0.0000 | |
| 117 | T | A | -1.3403 | |
| 118 | L | A | 0.0000 | |
| 119 | E | A | -1.9476 | |
| 120 | S | A | -1.3869 | |
| 121 | P | A | 0.0000 | |
| 122 | P | A | -0.7417 | |
| 123 | G | A | -0.7336 | |
| 124 | S | A | -0.7602 | |
| 125 | S | A | -0.9556 | |
| 126 | P | A | 0.0000 | |
| 127 | S | A | -0.6191 | |
| 128 | V | A | 0.0000 | |
| 129 | Q | A | -1.4264 | |
| 130 | C | A | 0.0000 | |
| 131 | R | A | -3.2835 | |
| 132 | S | A | 0.0000 | |
| 133 | P | A | -2.1820 | |
| 134 | R | A | -3.4145 | |
| 135 | G | A | -2.7179 | |
| 136 | K | A | -3.2312 | |
| 137 | N | A | -2.7571 | |
| 138 | I | A | -1.2769 | |
| 139 | Q | A | -1.7849 | |
| 140 | G | A | -1.4022 | |
| 141 | G | A | 0.0000 | |
| 142 | K | A | -2.2929 | |
| 143 | T | A | -1.4295 | |
| 144 | L | A | -0.8473 | |
| 145 | S | A | -0.5625 | |
| 146 | V | A | -0.3617 | |
| 147 | S | A | -1.1903 | |
| 148 | Q | A | -2.0185 | |
| 149 | L | A | 0.0000 | |
| 150 | E | A | -2.2115 | |
| 151 | L | A | -0.1817 | |
| 152 | Q | A | -1.5504 | |
| 153 | D | A | 0.0000 | |
| 154 | S | A | -0.3463 | |
| 155 | G | A | -1.1990 | |
| 156 | T | A | -1.5974 | |
| 157 | W | A | 0.0000 | |
| 158 | T | A | -1.9471 | |
| 159 | C | A | 0.0000 | |
| 160 | T | A | -1.2061 | |
| 161 | V | A | 0.0000 | |
| 162 | L | A | -1.0138 | |
| 163 | Q | A | -1.5036 | |
| 164 | N | A | -2.7024 | |
| 165 | Q | A | -2.7159 | |
| 166 | K | A | -2.7812 | |
| 167 | K | A | -2.3950 | |
| 168 | V | A | -1.4174 | |
| 169 | E | A | -1.7253 | |
| 170 | F | A | -1.3683 | |
| 171 | K | A | -2.3343 | |
| 172 | I | A | -1.5688 | |
| 173 | D | A | -2.1591 | |
| 174 | I | A | 0.0000 | |
| 175 | V | A | 0.0533 | |
| 176 | V | A | 0.0000 | |
| 177 | L | A | 1.7659 | |
| 178 | A | A | 0.8997 |