Chain sequence(s) |
A: KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KR1A,VN3A,KR2A |
Energy difference between WT (input) and mutated protein (by FoldX) | 3.14188 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:56) [INFO] FoldX: Starting FoldX energy minimalization (00:01:31) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14) [INFO] Main: Simulation completed successfully. (00:02:15) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | R | A | -3.6097 | mutated: KR1A |
2 | R | A | -3.8706 | mutated: KR2A |
3 | N | A | -2.8789 | mutated: VN3A |
4 | V | A | -1.7340 | |
5 | L | A | 0.0000 | |
6 | G | A | 0.0000 | |
7 | K | A | -2.4175 | |
8 | K | A | -3.5017 | |
9 | G | A | -3.0365 | |
10 | D | A | -3.3715 | |
11 | T | A | -2.4483 | |
12 | V | A | -1.5617 | |
13 | E | A | -1.8760 | |
14 | L | A | 0.0000 | |
15 | T | A | -1.0580 | |
16 | C | A | 0.0000 | |
17 | T | A | -0.7113 | |
18 | A | A | -2.1441 | |
19 | S | A | -1.7912 | |
20 | Q | A | -2.9236 | |
21 | K | A | -3.3235 | |
22 | K | A | -3.7038 | |
23 | S | A | -2.8699 | |
24 | I | A | -2.1011 | |
25 | Q | A | -2.1790 | |
26 | F | A | 0.0000 | |
27 | H | A | -1.3472 | |
28 | W | A | 0.0000 | |
29 | K | A | -1.3527 | |
30 | N | A | -1.4075 | |
31 | S | A | -1.5801 | |
32 | N | A | -1.8552 | |
33 | Q | A | -1.6423 | |
34 | I | A | -0.3768 | |
35 | K | A | -1.1856 | |
36 | I | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | N | A | -0.8735 | |
40 | Q | A | -1.1566 | |
41 | G | A | -0.8188 | |
42 | S | A | -0.1857 | |
43 | F | A | 1.0518 | |
44 | L | A | -0.1614 | |
45 | T | A | -0.5092 | |
46 | K | A | -1.4045 | |
47 | G | A | -1.0546 | |
48 | P | A | -1.1643 | |
49 | S | A | -1.4302 | |
50 | K | A | -2.2261 | |
51 | L | A | 0.0000 | |
52 | N | A | -2.0799 | |
53 | D | A | -2.6402 | |
54 | R | A | -2.1291 | |
55 | A | A | 0.0000 | |
56 | D | A | -1.8109 | |
57 | S | A | 0.0000 | |
58 | R | A | -2.5616 | |
59 | R | A | -2.7372 | |
60 | S | A | -2.0519 | |
61 | L | A | -2.0019 | |
62 | W | A | -2.3369 | |
63 | D | A | -3.3544 | |
64 | Q | A | -3.0244 | |
65 | G | A | 0.0000 | |
66 | N | A | -1.5263 | |
67 | F | A | 0.0000 | |
68 | P | A | 0.0000 | |
69 | L | A | 0.0000 | |
70 | I | A | 0.0000 | |
71 | I | A | 0.0000 | |
72 | K | A | -2.8311 | |
73 | N | A | -2.9993 | |
74 | L | A | 0.0000 | |
75 | K | A | -2.3586 | |
76 | I | A | -1.4606 | |
77 | E | A | -1.3462 | |
78 | D | A | 0.0000 | |
79 | S | A | 0.0000 | |
80 | D | A | -1.0226 | |
81 | T | A | -1.5713 | |
82 | Y | A | 0.0000 | |
83 | I | A | -2.0980 | |
84 | C | A | 0.0000 | |
85 | E | A | -3.2353 | |
86 | V | A | 0.0000 | |
87 | E | A | -3.6370 | |
88 | D | A | -3.7512 | |
89 | Q | A | -3.6156 | |
90 | K | A | -3.9479 | |
91 | E | A | -3.5891 | |
92 | E | A | -3.8198 | |
93 | V | A | 0.0000 | |
94 | Q | A | -2.0086 | |
95 | L | A | 0.0000 | |
96 | L | A | 0.0000 | |
97 | V | A | 0.0000 | |
98 | F | A | 0.0000 | |
99 | G | A | 0.0000 | |
100 | L | A | -1.2584 | |
101 | T | A | -0.9997 | |
102 | A | A | -1.5619 | |
103 | N | A | -1.9285 | |
104 | S | A | -1.8334 | |
105 | D | A | -2.4230 | |
106 | T | A | -1.8507 | |
107 | H | A | -1.1840 | |
108 | L | A | 0.2498 | |
109 | L | A | 1.1596 | |
110 | Q | A | -0.1265 | |
111 | G | A | -1.1482 | |
112 | Q | A | -1.7653 | |
113 | S | A | -1.0089 | |
114 | L | A | 0.0000 | |
115 | T | A | -0.8320 | |
116 | L | A | 0.0000 | |
117 | T | A | -1.3403 | |
118 | L | A | 0.0000 | |
119 | E | A | -1.9476 | |
120 | S | A | -1.3869 | |
121 | P | A | 0.0000 | |
122 | P | A | -0.7417 | |
123 | G | A | -0.7336 | |
124 | S | A | -0.7602 | |
125 | S | A | -0.9556 | |
126 | P | A | 0.0000 | |
127 | S | A | -0.6191 | |
128 | V | A | 0.0000 | |
129 | Q | A | -1.4264 | |
130 | C | A | 0.0000 | |
131 | R | A | -3.2835 | |
132 | S | A | 0.0000 | |
133 | P | A | -2.1820 | |
134 | R | A | -3.4145 | |
135 | G | A | -2.7179 | |
136 | K | A | -3.2312 | |
137 | N | A | -2.7571 | |
138 | I | A | -1.2769 | |
139 | Q | A | -1.7849 | |
140 | G | A | -1.4022 | |
141 | G | A | 0.0000 | |
142 | K | A | -2.2929 | |
143 | T | A | -1.4295 | |
144 | L | A | -0.8473 | |
145 | S | A | -0.5625 | |
146 | V | A | -0.3617 | |
147 | S | A | -1.1903 | |
148 | Q | A | -2.0185 | |
149 | L | A | 0.0000 | |
150 | E | A | -2.2115 | |
151 | L | A | -0.1817 | |
152 | Q | A | -1.5504 | |
153 | D | A | 0.0000 | |
154 | S | A | -0.3463 | |
155 | G | A | -1.1990 | |
156 | T | A | -1.5974 | |
157 | W | A | 0.0000 | |
158 | T | A | -1.9471 | |
159 | C | A | 0.0000 | |
160 | T | A | -1.2061 | |
161 | V | A | 0.0000 | |
162 | L | A | -1.0138 | |
163 | Q | A | -1.5036 | |
164 | N | A | -2.7024 | |
165 | Q | A | -2.7159 | |
166 | K | A | -2.7812 | |
167 | K | A | -2.3950 | |
168 | V | A | -1.4174 | |
169 | E | A | -1.7253 | |
170 | F | A | -1.3683 | |
171 | K | A | -2.3343 | |
172 | I | A | -1.5688 | |
173 | D | A | -2.1591 | |
174 | I | A | 0.0000 | |
175 | V | A | 0.0533 | |
176 | V | A | 0.0000 | |
177 | L | A | 1.7659 | |
178 | A | A | 0.8997 |