Project name: pep_20

Status: done

Started: 2026-07-27 21:05:24
Settings
Chain sequence(s) A: SSDIELDEEEQKKIEKLQDEILKEKYESRPLGSGNPLGEEADIAAFALR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:20)
Show buried residues

Minimal score value
-4.9516
Maximal score value
2.0172
Average score
-1.8196
Total score value
-89.1584

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.5334
2 S A -0.8653
3 D A -1.3477
4 I A 0.3279
5 E A -1.4615
6 L A -1.0571
7 D A -3.5620
8 E A -4.5147
9 E A -4.8861
10 E A -4.5772
11 Q A -3.8291
12 K A -4.9516
13 K A -4.2151
14 I A -2.4408
15 E A -4.1008
16 K A -3.8100
17 L A -1.6670
18 Q A -2.6918
19 D A -3.7933
20 E A -3.3827
21 I A -1.9615
22 L A -2.1678
23 K A -3.3301
24 E A -3.9897
25 K A -3.3983
26 Y A -1.7983
27 E A -3.0031
28 S A -2.5285
29 R A -2.4399
30 P A -0.6823
31 L A 0.5847
32 G A -0.3308
33 S A -0.7840
34 G A -1.1843
35 N A -1.6849
36 P A -0.8997
37 L A -0.4002
38 G A -1.6896
39 E A -2.6099
40 E A -1.9746
41 A A -1.1811
42 D A -1.3304
43 I A 1.1314
44 A A 0.4877
45 A A 0.7367
46 F A 2.0172
47 A A 1.4953
48 L A 1.5900
49 R A -0.4731
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Laboratory of Theory of Biopolymers 2018