| Chain sequence(s) |
A: SSDIELDEEEQKKIEKLQDEILKEKYESRPLGSGNPLGEEADIAAFALR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.5334 | |
| 2 | S | A | -0.8653 | |
| 3 | D | A | -1.3477 | |
| 4 | I | A | 0.3279 | |
| 5 | E | A | -1.4615 | |
| 6 | L | A | -1.0571 | |
| 7 | D | A | -3.5620 | |
| 8 | E | A | -4.5147 | |
| 9 | E | A | -4.8861 | |
| 10 | E | A | -4.5772 | |
| 11 | Q | A | -3.8291 | |
| 12 | K | A | -4.9516 | |
| 13 | K | A | -4.2151 | |
| 14 | I | A | -2.4408 | |
| 15 | E | A | -4.1008 | |
| 16 | K | A | -3.8100 | |
| 17 | L | A | -1.6670 | |
| 18 | Q | A | -2.6918 | |
| 19 | D | A | -3.7933 | |
| 20 | E | A | -3.3827 | |
| 21 | I | A | -1.9615 | |
| 22 | L | A | -2.1678 | |
| 23 | K | A | -3.3301 | |
| 24 | E | A | -3.9897 | |
| 25 | K | A | -3.3983 | |
| 26 | Y | A | -1.7983 | |
| 27 | E | A | -3.0031 | |
| 28 | S | A | -2.5285 | |
| 29 | R | A | -2.4399 | |
| 30 | P | A | -0.6823 | |
| 31 | L | A | 0.5847 | |
| 32 | G | A | -0.3308 | |
| 33 | S | A | -0.7840 | |
| 34 | G | A | -1.1843 | |
| 35 | N | A | -1.6849 | |
| 36 | P | A | -0.8997 | |
| 37 | L | A | -0.4002 | |
| 38 | G | A | -1.6896 | |
| 39 | E | A | -2.6099 | |
| 40 | E | A | -1.9746 | |
| 41 | A | A | -1.1811 | |
| 42 | D | A | -1.3304 | |
| 43 | I | A | 1.1314 | |
| 44 | A | A | 0.4877 | |
| 45 | A | A | 0.7367 | |
| 46 | F | A | 2.0172 | |
| 47 | A | A | 1.4953 | |
| 48 | L | A | 1.5900 | |
| 49 | R | A | -0.4731 |