Project name: 437de48b728920e

Status: done

Started: 2026-01-28 10:59:02
Settings
Chain sequence(s) L: KRGFAYDD
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
-2.3083
Maximal score value
1.6573
Average score
-0.6498
Total score value
-5.1986

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 K L -2.0882
1 R L -2.3083
2 G L -0.8868
3 F L 1.6573
4 A L 0.4605
5 Y L 1.3644
6 D L -1.6082
7 D L -1.7893
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018