Project name: 4383546663eadd9

Status: done

Started: 2025-02-17 15:27:35
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Chain sequence(s) A: AQSVPWGISRVQAPAAHNRGLTGSGVKVAVLDTGISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLGSTNLYGSGLVNAEAATR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:17)
Show buried residues

Minimal score value
-2.3365
Maximal score value
0.8029
Average score
-0.482
Total score value
-129.666

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.0274
2 Q A -0.1474
3 S A 0.1019
4 V A 0.6341
5 P A 0.0000
6 W A -0.1670
7 G A 0.0000
8 I A 0.0000
9 S A -0.3801
10 R A -0.9519
11 V A 0.0000
12 Q A -0.9906
13 A A 0.0000
14 P A -0.8785
15 A A -1.3537
16 A A 0.0000
17 H A -1.5558
18 N A -2.0667
19 R A -2.2995
20 G A -1.6263
21 L A 0.0000
22 T A -0.9128
23 G A 0.0000
24 S A -0.6991
25 G A -0.7990
26 V A 0.0000
27 K A -1.0865
28 V A 0.0000
29 A A 0.0000
30 V A 0.0000
31 L A 0.0000
32 D A 0.0000
33 T A 0.0000
34 G A 0.0000
35 I A 0.0000
37 S A -0.8022
38 T A -0.5405
39 H A 0.0000
40 P A -0.4352
41 D A 0.0000
42 L A 0.0000
43 N A -1.4544
44 I A -0.9389
45 R A -1.9810
46 G A -1.0754
47 G A -0.7078
48 A A -0.1719
49 S A -0.4068
50 F A -0.1700
51 V A -0.3593
52 P A -0.5210
53 G A -0.7657
54 E A -0.9458
55 P A -0.7351
56 S A -0.8014
57 T A -0.8304
59 Q A -1.5554
60 D A 0.0000
61 G A -1.1834
62 N A -1.0195
63 G A 0.0000
64 H A -0.3428
65 G A 0.0000
66 T A 0.0000
67 H A 0.0000
68 V A 0.0000
69 A A 0.0000
70 G A 0.0000
71 T A 0.0000
72 I A 0.0000
73 A A 0.0000
74 A A 0.0000
75 L A -0.8084
76 N A -1.3390
77 N A -1.0637
78 S A -0.4284
79 I A 0.2351
80 G A 0.0418
81 V A 0.0000
82 L A 0.0000
83 G A 0.0000
84 V A 0.0000
85 A A 0.0000
86 P A 0.0000
87 S A -0.6559
88 A A 0.0000
89 E A 0.0000
90 L A 0.0000
91 Y A -0.6234
92 A A 0.0000
93 V A 0.0000
94 K A 0.0000
95 V A 0.0000
96 L A 0.0000
97 G A -0.6214
98 A A -0.8314
99 S A -0.6538
100 G A -0.7004
101 S A -0.5344
102 G A -0.4454
103 S A -0.1576
104 V A 0.1085
105 S A -0.2447
106 S A 0.0000
107 I A 0.0000
108 A A 0.0000
109 Q A -1.3949
110 G A 0.0000
111 L A 0.0000
112 E A -2.3000
113 W A -1.5041
114 A A 0.0000
115 G A -1.9919
116 N A -2.3365
117 N A -2.0872
118 G A -1.5928
119 M A 0.0000
120 H A -0.9139
121 V A 0.0000
122 A A 0.0000
123 N A 0.0000
124 L A 0.0000
125 S A 0.0000
126 L A -0.3397
127 G A -0.8855
128 S A -0.7382
129 P A -0.7151
130 S A -0.5614
131 P A -0.7378
132 S A -0.4839
133 A A -0.6200
134 T A -0.7289
135 L A 0.0000
136 E A -1.7104
137 Q A -1.8949
138 A A 0.0000
139 V A 0.0000
140 N A -1.4381
141 S A -1.4284
142 A A 0.0000
143 T A -0.8049
144 S A -0.8557
145 R A -1.6761
146 G A -0.7961
147 V A 0.0000
148 L A 0.0000
149 V A 0.0000
150 V A 0.0000
151 A A 0.0000
152 A A 0.0000
153 S A 0.0000
154 G A -0.9072
155 N A -1.4793
156 S A -0.8858
157 G A -0.5910
160 A A -0.4522
161 G A -0.5092
162 S A -0.6361
165 I A 0.0000
166 S A 0.0000
167 Y A 0.0000
168 P A 0.0000
169 A A 0.0000
170 R A -1.2804
171 Y A -0.9255
172 A A -0.6146
173 N A -0.6640
174 A A 0.0000
175 M A 0.0000
176 A A 0.0000
177 V A 0.0000
178 G A 0.0000
179 A A 0.0000
180 T A 0.0000
181 D A -1.8223
182 Q A -1.8847
183 N A -2.2607
184 N A -1.9533
185 N A -2.0885
186 R A -1.0964
187 A A 0.0000
188 S A -0.5741
189 F A -0.4881
190 S A 0.0000
191 Q A 0.0000
192 Y A -0.3065
193 G A -0.6424
194 A A -0.6432
195 G A -0.9005
196 L A 0.0000
197 D A 0.0000
198 I A 0.0000
199 V A 0.0000
200 A A 0.0000
201 P A 0.0000
202 G A 0.0000
203 V A -1.0859
204 N A -1.6903
205 V A 0.0000
206 Q A -0.6612
207 S A 0.0000
208 T A 0.0000
209 Y A 0.1745
210 P A -0.4300
211 G A -0.4878
212 S A -0.3816
213 T A -0.0205
214 Y A 0.2647
215 A A -0.0028
216 S A -0.6958
217 L A -0.7398
218 N A -1.5891
219 G A 0.0000
220 T A 0.0000
221 S A -0.4169
222 M A 0.0000
223 A A 0.0000
224 T A 0.0000
225 P A 0.0000
226 H A 0.0000
227 V A 0.0000
228 A A 0.0000
229 G A 0.0000
230 A A 0.0000
231 A A 0.0000
232 A A 0.0000
233 L A 0.0000
234 V A 0.0000
235 K A -1.1107
236 Q A -1.1491
237 K A -1.6183
238 N A -1.0850
239 P A -0.8851
240 S A -0.6276
241 W A -0.3272
242 S A -0.0992
243 N A -0.1197
244 V A 0.8029
245 Q A -0.5930
246 I A 0.0000
247 R A -0.6727
248 N A -1.3903
249 H A -1.2523
250 L A 0.0000
251 K A -1.5393
252 N A -1.8400
253 T A -1.2383
254 A A -0.7462
255 T A -0.3831
256 S A -0.4401
257 L A -0.2523
258 G A -0.5059
259 S A -0.5755
260 T A -0.6508
261 N A -1.1978
262 L A -0.3412
263 Y A -0.3240
264 G A 0.0000
265 S A -0.6876
266 G A 0.0000
267 L A 0.0000
268 V A 0.0000
269 N A -0.7662
270 A A 0.0000
271 E A -1.2989
272 A A -1.0433
273 A A 0.0000
274 T A 0.0000
275 R A -2.1854
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Laboratory of Theory of Biopolymers 2018