| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVENGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPLHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGVPLPAAPPPSPLYVPPPPTSPTAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9417 | |
| 2 | L | A | 1.9631 | |
| 3 | P | A | 0.6469 | |
| 4 | P | A | 0.3728 | |
| 5 | T | A | 0.1196 | |
| 6 | T | A | 0.1365 | |
| 7 | P | A | 0.1818 | |
| 8 | V | A | 1.2355 | |
| 9 | A | A | 0.0802 | |
| 10 | K | A | -1.0302 | |
| 11 | V | A | -0.1775 | |
| 12 | Q | A | -1.4121 | |
| 13 | S | A | -1.5581 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4286 | |
| 16 | E | A | -2.4432 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4558 | |
| 20 | P | A | 0.1254 | |
| 21 | T | A | 0.1769 | |
| 22 | S | A | -0.0983 | |
| 23 | L | A | 0.0846 | |
| 24 | F | A | -0.0346 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2978 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9056 | |
| 31 | R | A | -2.6880 | |
| 32 | L | A | -0.8022 | |
| 33 | L | A | 1.1614 | |
| 34 | T | A | 1.3749 | |
| 35 | V | A | 1.8444 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2580 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6790 | |
| 40 | E | A | -1.8066 | |
| 41 | D | A | -1.1293 | |
| 42 | I | A | 0.5111 | |
| 43 | V | A | 0.6393 | |
| 44 | E | A | -1.4690 | |
| 45 | N | A | -2.0565 | |
| 46 | G | A | -1.3619 | |
| 47 | K | A | -1.1462 | |
| 48 | V | A | 1.1774 | |
| 49 | V | A | 1.7348 | |
| 50 | V | A | 1.0486 | |
| 51 | P | A | 0.3074 | |
| 52 | K | A | -0.7311 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1625 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3845 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2693 | |
| 70 | K | A | -1.7879 | |
| 71 | F | A | -0.6376 | |
| 72 | A | A | -0.5736 | |
| 73 | L | A | -0.8595 | |
| 74 | P | A | -1.2028 | |
| 75 | Q | A | -2.5022 | |
| 76 | K | A | -3.1048 | |
| 77 | D | A | -2.9900 | |
| 78 | F | A | -1.6708 | |
| 79 | Y | A | -1.8913 | |
| 80 | D | A | -2.6938 | |
| 81 | P | A | -2.3037 | |
| 82 | E | A | -3.0478 | |
| 83 | K | A | -3.3945 | |
| 84 | E | A | -2.4576 | |
| 85 | R | A | -1.2923 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6516 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9755 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3683 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6915 | |
| 99 | G | A | -0.5271 | |
| 100 | P | A | -0.3838 | |
| 101 | L | A | 0.0865 | |
| 102 | G | A | -0.1900 | |
| 103 | K | A | -0.6042 | |
| 104 | G | A | -0.4428 | |
| 105 | T | A | -0.4413 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1386 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3961 | |
| 110 | L | A | 0.2519 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0969 | |
| 113 | K | A | -0.3770 | |
| 114 | L | A | -0.7876 | |
| 115 | G | A | -1.0150 | |
| 116 | D | A | -1.4001 | |
| 117 | T | A | -1.0973 | |
| 118 | E | A | -1.8542 | |
| 119 | N | A | -2.1860 | |
| 120 | P | A | -1.9630 | |
| 121 | T | A | -1.6301 | |
| 122 | E | A | -2.3776 | |
| 123 | P | A | -1.1463 | |
| 124 | L | A | -0.6633 | |
| 125 | H | A | -0.8012 | |
| 126 | C | A | -0.7740 | |
| 127 | G | A | -1.2510 | |
| 128 | A | A | -1.1677 | |
| 129 | D | A | -2.1807 | |
| 130 | D | A | -1.7379 | |
| 131 | R | A | -1.1258 | |
| 132 | V | A | 0.2193 | |
| 133 | A | A | 0.4340 | |
| 134 | F | A | 0.2689 | |
| 135 | S | A | -0.0712 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6105 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5631 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1905 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1492 | |
| 157 | D | A | 0.3269 | |
| 158 | L | A | 0.8030 | |
| 159 | A | A | 0.1648 | |
| 160 | E | A | -1.4572 | |
| 161 | P | A | -0.2120 | |
| 162 | C | A | 0.1884 | |
| 163 | P | A | -0.1665 | |
| 164 | G | A | -0.0717 | |
| 165 | L | A | 0.6017 | |
| 166 | P | A | -0.1094 | |
| 167 | P | A | -0.3365 | |
| 168 | G | A | -0.4249 | |
| 169 | A | A | 0.3006 | |
| 170 | C | A | 1.0181 | |
| 171 | P | A | 0.5286 | |
| 172 | P | A | 0.8423 | |
| 173 | I | A | 1.9785 | |
| 174 | Q | A | 0.8452 | |
| 175 | L | A | 1.4903 | |
| 176 | V | A | 0.8613 | |
| 177 | N | A | -0.2870 | |
| 178 | S | A | 0.0337 | |
| 179 | V | A | 0.4329 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3896 | |
| 182 | D | A | 0.0851 | |
| 183 | G | A | -0.1530 | |
| 184 | D | A | -0.5377 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1129 | |
| 190 | F | A | 0.0652 | |
| 191 | G | A | -0.1041 | |
| 192 | N | A | -0.2642 | |
| 193 | M | A | -0.1239 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3948 | |
| 197 | E | A | -2.5958 | |
| 198 | L | A | -1.2230 | |
| 199 | Q | A | -2.5476 | |
| 200 | Q | A | -3.3027 | |
| 201 | D | A | -3.5350 | |
| 202 | R | A | -3.3198 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1732 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3445 | |
| 211 | S | A | -1.9009 | |
| 212 | T | A | -1.4333 | |
| 213 | R | A | -2.0901 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1604 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3461 | |
| 220 | L | A | 0.6189 | |
| 221 | K | A | -1.0883 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8102 | |
| 224 | N | A | -1.4826 | |
| 225 | E | A | -1.2207 | |
| 226 | A | A | -0.5996 | |
| 227 | Y | A | -0.3618 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6577 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0711 | |
| 234 | F | A | 0.2578 | |
| 235 | G | A | -0.8198 | |
| 236 | R | A | -2.6091 | |
| 237 | R | A | -2.8762 | |
| 238 | E | A | -2.1511 | |
| 239 | Q | A | -0.2035 | |
| 240 | V | A | 1.4342 | |
| 241 | Y | A | 1.1437 | |
| 242 | A | A | 0.2719 | |
| 243 | R | A | -0.8331 | |
| 244 | H | A | -0.7611 | |
| 245 | F | A | 0.0588 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5890 | |
| 249 | C | A | -0.9157 | |
| 250 | G | A | -0.9300 | |
| 251 | P | A | -0.5199 | |
| 252 | D | A | -0.4035 | |
| 253 | G | A | 0.0632 | |
| 254 | V | A | 1.3235 | |
| 255 | P | A | 0.4794 | |
| 256 | L | A | 1.0612 | |
| 257 | P | A | 0.4966 | |
| 258 | A | A | 0.2156 | |
| 259 | A | A | 0.3625 | |
| 260 | P | A | -0.2428 | |
| 261 | P | A | -0.1510 | |
| 262 | P | A | 0.0595 | |
| 263 | S | A | 0.5802 | |
| 264 | P | A | 0.6911 | |
| 265 | L | A | 1.9355 | |
| 266 | Y | A | 1.7547 | |
| 267 | V | A | 1.9454 | |
| 268 | P | A | 1.0419 | |
| 269 | P | A | 0.4452 | |
| 270 | P | A | -0.2927 | |
| 271 | P | A | -0.2399 | |
| 272 | T | A | -0.1751 | |
| 273 | S | A | -0.1104 | |
| 274 | P | A | -0.2332 | |
| 275 | T | A | 0.3722 | |
| 276 | A | A | 0.7393 | |
| 277 | V | A | 1.7823 | |
| 278 | L | A | 1.3122 | |
| 279 | P | A | 0.2658 | |
| 280 | P | A | -0.1464 | |
| 281 | T | A | -0.1407 | |
| 282 | D | A | -0.7942 | |
| 283 | Y | A | 0.7552 | |
| 284 | F | A | 0.6504 | |
| 285 | G | A | 0.1872 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9447 | |
| 291 | L | A | 1.6240 | |
| 292 | V | A | 0.6486 | |
| 293 | S | A | -0.1499 | |
| 294 | S | A | -0.9511 | |
| 295 | D | A | -1.8422 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1134 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6508 | |
| 301 | R | A | -1.8705 | |
| 302 | P | A | -0.9645 | |
| 303 | F | A | -0.1905 | |
| 304 | W | A | -0.5663 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0856 | |
| 307 | R | A | -2.8402 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2778 | |
| 310 | G | A | -1.2301 | |
| 311 | N | A | -1.2751 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7735 | |
| 319 | N | A | -0.8433 | |
| 320 | E | A | -1.0340 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3252 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0678 | |
| 333 | N | A | 0.5704 | |
| 334 | F | A | 1.7780 | |
| 335 | T | A | 0.8903 | |
| 336 | I | A | 0.4736 | |
| 337 | S | A | -0.8258 | |
| 338 | Q | A | -1.4855 | |
| 339 | Q | A | -0.8535 | |
| 340 | L | A | 0.7982 | |
| 341 | C | A | 0.4215 | |
| 342 | T | A | 0.1495 | |
| 343 | P | A | -0.2774 | |
| 344 | A | A | 0.1935 | |
| 345 | P | A | 0.1757 | |
| 346 | N | A | -0.2837 | |
| 347 | V | A | 1.5534 | |
| 348 | Y | A | 1.4511 | |
| 349 | D | A | 0.0670 | |
| 350 | P | A | -0.3271 | |
| 351 | S | A | -0.2638 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5531 | |
| 354 | K | A | -1.6639 | |
| 355 | N | A | -1.6997 | |
| 356 | Y | A | -0.0751 | |
| 357 | L | A | 0.6605 | |
| 358 | R | A | 1.0055 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3962 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0743 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0621 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6911 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3081 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3138 | |
| 376 | L | A | -1.7040 | |
| 377 | D | A | -1.9791 | |
| 378 | P | A | -1.0327 | |
| 379 | G | A | -1.0102 | |
| 380 | V | A | -0.9306 | |
| 381 | L | A | -0.5279 | |
| 382 | A | A | -0.6538 | |
| 383 | H | A | -0.8096 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4078 | |
| 386 | T | A | -0.5517 | |
| 387 | M | A | -0.2973 | |
| 388 | N | A | -0.8614 | |
| 389 | P | A | -1.2313 | |
| 390 | T | A | -1.4032 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3882 | |
| 393 | E | A | -2.7113 | |
| 394 | N | A | -2.4325 | |
| 395 | W | A | -1.2993 | |
| 396 | N | A | -1.0356 | |
| 397 | L | A | -0.1479 | |
| 398 | G | A | 0.5501 | |
| 399 | F | A | 2.4217 | |
| 400 | V | A | 1.8362 | |
| 401 | P | A | 0.0626 | |
| 402 | P | A | -1.8065 | |
| 403 | K | A | -3.2889 | |
| 404 | E | A | -3.8021 | |
| 405 | R | A | -3.7986 | |
| 406 | E | A | -3.7334 | |
| 407 | D | A | -2.8393 | |
| 408 | P | A | -1.7441 | |
| 409 | Y | A | -0.9780 | |
| 410 | K | A | -2.1035 | |
| 411 | G | A | -0.6345 | |
| 412 | L | A | 0.6833 | |
| 413 | I | A | 1.5889 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4022 | |
| 416 | E | A | -1.7100 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9641 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0658 | |
| 421 | E | A | -2.8010 | |
| 422 | R | A | -2.6707 | |
| 423 | F | A | -1.2986 | |
| 424 | S | A | -1.4827 | |
| 425 | Q | A | -1.8766 | |
| 426 | D | A | -2.9796 | |
| 427 | L | A | -2.1676 | |
| 428 | D | A | -3.0277 | |
| 429 | Q | A | -2.7542 | |
| 430 | F | A | -1.6036 | |
| 431 | A | A | -1.1361 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2897 | |
| 435 | K | A | -1.0874 | |
| 436 | F | A | -0.1049 | |
| 437 | L | A | 0.7816 | |
| 438 | Y | A | 0.6253 | |
| 439 | Q | A | -0.3922 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine