Project name: BBBN-2ndCassette-v2

Status: done

Started: 2026-05-19 15:05:57
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Chain sequence(s) A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARRNLVFSIDLGPFSFPFYLQRIIRLSSACGSLSPASQTPPPSPPPPLVPPVVLGSPKPEEIPAAWIPSGTTILNCFPRGRRGGDVYTVAGSSGLSQVPSRCSPSVCLVLNWEELCNNGSEILAYNILLDAAPVDTTAFHHGSLLQRLRALSAARGMSLWDQRGAYEVARASLLSKDPTPNTAILQSSLIMGEQNLQWILNGEFQSEKSKISKFHFLVANSQSKMKSYPYDVPDYA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:45)
Show buried residues

Minimal score value
-3.6817
Maximal score value
3.8043
Average score
-0.1954
Total score value
-51.3864

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.0227
2 D A -1.9361
3 A A -1.1101
4 M A -0.4408
5 K A -2.0166
6 R A -1.9662
7 G A -0.4572
8 L A 1.3047
9 C A 1.6536
10 C A 2.1933
11 V A 3.2762
12 L A 3.3498
13 L A 3.8043
14 L A 3.4899
15 C A 2.6688
16 G A 1.8689
17 A A 2.4922
18 V A 3.4526
19 F A 3.5292
20 V A 3.0150
21 S A 1.0516
22 P A -0.2756
23 S A -0.9160
24 Q A -1.8411
25 E A -1.7322
26 I A -0.1453
27 H A -1.2115
28 A A -1.5524
29 R A -3.3059
30 R A -3.1484
31 N A -1.7996
32 L A 0.3861
33 V A 1.8025
34 F A 1.3940
35 S A 0.8471
36 I A 0.5541
37 D A -0.6678
38 L A 1.1458
39 G A 0.4960
40 P A 0.7656
41 F A 2.3139
42 S A 1.9423
43 F A 2.9760
44 P A 2.2690
45 F A 3.2934
46 Y A 2.5455
47 L A 1.8693
48 Q A -0.0857
49 R A -1.0803
50 I A 0.6876
51 I A 0.4880
52 R A -0.1384
53 L A 1.1132
54 S A 0.1935
55 S A -0.0646
56 A A 0.0652
57 C A 0.3441
58 G A 0.1237
59 S A 0.4248
60 L A 1.2725
61 S A 0.3719
62 P A -0.2098
63 A A -0.3283
64 S A -0.8717
65 Q A -1.4469
66 T A -0.9023
67 P A -0.8161
68 P A -0.7527
69 P A -0.6384
70 S A -0.6556
71 P A -0.6749
72 P A -0.4370
73 P A 0.0455
74 P A 0.7345
75 L A 2.1126
76 V A 2.3446
77 P A 1.0881
78 P A 0.9705
79 V A 1.4020
80 V A 1.2708
81 L A 0.8995
82 G A -0.1020
83 S A -0.6446
84 P A -1.5791
85 K A -2.6496
86 P A -2.3562
87 E A -3.2595
88 E A -3.2320
89 I A -1.3967
90 P A -0.4695
91 A A 0.0593
92 A A 0.7014
93 W A 1.3520
94 I A 1.2084
95 P A 0.2999
96 S A -0.2685
97 G A -0.2604
98 T A 0.5159
99 T A 0.7237
100 I A 1.6582
101 L A 1.6049
102 N A 0.7182
103 C A 0.9088
104 F A 0.3076
105 P A -0.8727
106 R A -2.6003
107 G A -2.5774
108 R A -3.6817
109 R A -3.4853
110 G A -2.1017
111 G A -1.4001
112 D A -0.5201
113 V A 2.0519
114 Y A 2.3145
115 T A 2.0028
116 V A 2.3208
117 A A 1.1046
118 G A 0.0445
119 S A -0.2268
120 S A -0.3278
121 G A 0.0925
122 L A 1.2796
123 S A 0.6820
124 Q A 0.6592
125 V A 1.4487
126 P A 0.2088
127 S A -0.3980
128 R A -1.5584
129 C A -0.7185
130 S A -0.4202
131 P A -0.1972
132 S A 0.4457
133 V A 1.6288
134 C A 1.4771
135 L A 1.4521
136 V A 1.4998
137 L A 0.0000
138 N A -1.2140
139 W A -1.3950
140 E A -2.8111
141 E A -2.7310
142 L A -0.2084
143 C A -0.4025
144 N A -1.7382
145 N A -1.9074
146 G A -1.6731
147 S A -1.6321
148 E A -1.5629
149 I A 0.0201
150 L A 1.1491
151 A A 0.7667
152 Y A 0.9358
153 N A 0.1514
154 I A 0.5181
155 L A 0.5389
156 L A 0.6295
157 D A -0.9429
158 A A -0.0345
159 A A -0.3742
160 P A -0.0711
161 V A 0.5196
162 D A -1.0709
163 T A -0.5822
164 T A -0.6818
165 A A -0.8137
166 F A -0.5371
167 H A -1.3683
168 H A -1.4913
169 G A -0.6446
170 S A 0.2142
171 L A 1.3584
172 L A 1.0737
173 Q A -0.9681
174 R A -0.8270
175 L A -0.0146
176 R A -1.4265
177 A A -1.3277
178 L A -0.9477
179 S A 0.0000
180 A A -0.8401
181 A A -1.1752
182 R A -1.7287
183 G A -0.8927
184 M A 0.0324
185 S A 0.1221
186 L A 0.4130
187 W A -0.0807
188 D A -2.1840
189 Q A -2.6972
190 R A -2.8159
191 G A -1.7148
192 A A -0.7897
193 Y A 0.4040
194 E A -0.5835
195 V A 0.7911
196 A A -0.2511
197 R A -1.4031
198 A A -0.1819
199 S A 0.3781
200 L A 1.6225
201 L A 1.3809
202 S A -0.3093
203 K A -2.0590
204 D A -2.5485
205 P A -1.6005
206 T A -1.4878
207 P A -1.8695
208 N A -1.1111
209 T A -0.8507
210 A A -0.2846
211 I A -0.4932
212 L A 0.0000
213 Q A -1.2754
214 S A -0.2624
215 S A 0.3894
216 L A 1.6577
217 I A 1.4539
218 M A 0.6389
219 G A -1.2359
220 E A -2.4754
221 Q A -2.4252
222 N A -1.6637
223 L A 0.7946
224 Q A 0.7691
225 W A 1.7810
226 I A 1.1119
227 L A -0.0584
228 N A -1.4812
229 G A -1.4376
230 E A -2.1271
231 F A -1.1569
232 Q A -2.3009
233 S A -2.6751
234 E A -3.2279
235 K A -3.1845
236 S A -2.2551
237 K A -2.3083
238 I A -0.4391
239 S A -1.0577
240 K A -1.6338
241 F A 0.0622
242 H A -0.2153
243 F A 0.7578
244 L A 0.6822
245 V A 0.3145
246 A A -0.7426
247 N A -2.2300
248 S A -1.9285
249 Q A -2.2506
250 S A -2.0442
251 K A -2.5975
252 M A -1.3650
253 K A -1.5344
254 S A -0.1513
255 Y A 1.0611
256 P A 0.1722
257 Y A 0.4920
258 D A -1.4208
259 V A -0.3490
260 P A -0.6410
261 D A -1.2625
262 Y A 0.5256
263 A A 0.1744
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Laboratory of Theory of Biopolymers 2018