| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0366 | |
| 2 | V | H | -1.3419 | |
| 3 | Q | H | -1.3246 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.1488 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3783 | |
| 8 | G | H | -0.6758 | |
| 9 | G | H | 0.1583 | |
| 11 | G | H | 0.8493 | |
| 12 | L | H | 1.3373 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.3828 | |
| 15 | P | H | -1.5775 | |
| 16 | G | H | -1.4091 | |
| 17 | G | H | -0.9710 | |
| 18 | S | H | -1.1184 | |
| 19 | L | H | -0.7851 | |
| 20 | R | H | -1.6671 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3834 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2925 | |
| 25 | A | H | -0.7203 | |
| 26 | S | H | -1.0001 | |
| 27 | G | H | -1.3460 | |
| 28 | F | H | -1.4531 | |
| 29 | N | H | -2.3951 | |
| 30 | I | H | 0.0000 | |
| 35 | K | H | -2.5136 | |
| 36 | D | H | -2.8884 | |
| 37 | T | H | 0.0000 | |
| 38 | Y | H | -0.4209 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6147 | |
| 45 | A | H | -1.0220 | |
| 46 | P | H | -0.8116 | |
| 47 | G | H | -1.4625 | |
| 48 | K | H | -2.3867 | |
| 49 | G | H | -1.6787 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0296 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | -0.2919 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.2274 | |
| 58 | P | H | -0.9433 | |
| 59 | T | H | -1.0577 | |
| 62 | N | H | -0.8759 | |
| 63 | G | H | -0.3955 | |
| 64 | Y | H | 0.6982 | |
| 65 | T | H | -0.0422 | |
| 66 | R | H | -1.1524 | |
| 67 | Y | H | -1.4522 | |
| 68 | A | H | -1.6350 | |
| 69 | D | H | -2.6105 | |
| 70 | S | H | -1.7552 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7646 | |
| 74 | G | H | -1.7269 | |
| 75 | R | H | -1.4549 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9704 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1023 | |
| 80 | A | H | -0.7589 | |
| 81 | D | H | -1.2516 | |
| 82 | T | H | -1.4883 | |
| 83 | S | H | -1.4971 | |
| 84 | K | H | -2.1994 | |
| 85 | N | H | -1.7386 | |
| 86 | T | H | -0.9002 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4199 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1308 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2434 | |
| 93 | S | H | -1.1803 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1855 | |
| 96 | A | H | -1.6492 | |
| 97 | E | H | -2.1933 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3425 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7593 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | R | H | -0.3323 | |
| 107 | W | H | 0.0000 | |
| 108 | G | H | -0.5794 | |
| 109 | G | H | -1.3019 | |
| 110 | D | H | -2.1651 | |
| 111 | G | H | -1.1452 | |
| 112 | F | H | -0.3916 | |
| 113 | Y | H | -0.0013 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.6528 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5601 | |
| 121 | G | H | -0.4368 | |
| 122 | T | H | 0.4701 | |
| 123 | L | H | 1.6905 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3436 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5539 | |
| 128 | S | H | -0.5616 | |
| 1 | D | L | -2.2380 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3091 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4523 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8933 | |
| 8 | P | L | -0.6318 | |
| 9 | S | L | -0.8787 | |
| 10 | S | L | -0.8908 | |
| 11 | L | L | -0.6604 | |
| 12 | S | L | -0.9519 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6195 | |
| 15 | V | L | 0.3174 | |
| 16 | G | L | -0.6114 | |
| 17 | D | L | -1.5064 | |
| 18 | R | L | -2.1973 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6199 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7436 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7164 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.0442 | |
| 27 | Q | L | -2.4459 | |
| 28 | D | L | -2.0025 | |
| 29 | V | L | 0.0000 | |
| 36 | N | L | -1.3902 | |
| 37 | T | L | -0.7512 | |
| 38 | A | L | -0.0533 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9072 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6965 | |
| 46 | P | L | -1.1633 | |
| 47 | G | L | -1.6582 | |
| 48 | K | L | -2.6814 | |
| 49 | A | L | -1.7653 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.7339 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 1.1600 | |
| 56 | S | L | 0.4755 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.7520 | |
| 66 | F | L | 2.2282 | |
| 67 | L | L | 1.5112 | |
| 68 | Y | L | 0.6749 | |
| 69 | S | L | 0.0727 | |
| 70 | G | L | -0.3842 | |
| 71 | V | L | -0.1979 | |
| 72 | P | L | -0.2604 | |
| 74 | S | L | -0.3489 | |
| 75 | R | L | -0.7388 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.1010 | |
| 78 | G | L | 0.1176 | |
| 79 | S | L | -0.5232 | |
| 80 | R | L | -1.5448 | |
| 83 | S | L | -1.1949 | |
| 84 | G | L | -1.5827 | |
| 85 | T | L | -1.9313 | |
| 86 | D | L | -1.8807 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7396 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6386 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4055 | |
| 93 | S | L | -1.1193 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5447 | |
| 96 | P | L | -0.8710 | |
| 97 | E | L | -1.6294 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2374 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8296 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.2904 | |
| 108 | Y | L | 0.4767 | |
| 109 | T | L | 0.0149 | |
| 114 | T | L | -0.4027 | |
| 115 | P | L | -0.7950 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.7760 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.9135 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4667 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2483 | |
| 126 | I | L | -0.5030 | |
| 127 | K | L | -1.4782 |