| Chain sequence(s) |
A: GPETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0939 | |
| 2 | P | A | -1.3407 | |
| 3 | E | A | -2.2238 | |
| 4 | T | A | -0.9561 | |
| 5 | L | A | -0.7763 | |
| 6 | C | A | 0.1828 | |
| 7 | G | A | -0.4480 | |
| 8 | A | A | -0.9988 | |
| 9 | E | A | -2.3143 | |
| 10 | L | A | 0.0000 | |
| 11 | V | A | -0.3100 | |
| 12 | D | A | -1.8057 | |
| 13 | A | A | -0.6327 | |
| 14 | L | A | 0.0000 | |
| 15 | Q | A | -0.9587 | |
| 16 | F | A | 0.9835 | |
| 17 | V | A | -0.0176 | |
| 18 | C | A | 0.0000 | |
| 19 | G | A | -1.0820 | |
| 20 | D | A | -2.0022 | |
| 21 | R | A | -1.8471 | |
| 22 | G | A | -0.6166 | |
| 23 | F | A | -0.0088 | |
| 24 | Y | A | 1.0227 | |
| 25 | F | A | 1.2034 | |
| 26 | N | A | -0.8221 | |
| 27 | K | A | -1.3604 | |
| 28 | P | A | -0.6921 | |
| 29 | T | A | -0.6191 | |
| 30 | G | A | -0.2559 | |
| 31 | Y | A | 0.7640 | |
| 32 | G | A | -0.1236 | |
| 33 | S | A | -0.6297 | |
| 34 | S | A | -1.0907 | |
| 35 | S | A | -1.7315 | |
| 36 | R | A | -2.9241 | |
| 37 | R | A | -3.0709 | |
| 38 | A | A | -1.8042 | |
| 39 | P | A | -1.5830 | |
| 40 | Q | A | -2.1022 | |
| 41 | T | A | -1.0495 | |
| 42 | G | A | -0.6254 | |
| 43 | I | A | 0.0000 | |
| 44 | V | A | 0.6136 | |
| 45 | D | A | -0.2877 | |
| 46 | E | A | -0.6391 | |
| 47 | C | A | 0.0000 | |
| 48 | C | A | 0.1200 | |
| 49 | F | A | 1.0000 | |
| 50 | R | A | -1.1829 | |
| 51 | S | A | -1.1750 | |
| 52 | C | A | -1.0319 | |
| 53 | D | A | -1.9868 | |
| 54 | L | A | -1.1625 | |
| 55 | R | A | -2.6466 | |
| 56 | R | A | -2.2919 | |
| 57 | L | A | 0.0000 | |
| 58 | E | A | -2.1963 | |
| 59 | M | A | -0.9874 | |
| 60 | Y | A | 0.0000 | |
| 61 | C | A | 0.0000 | |
| 62 | A | A | 0.0000 | |
| 63 | P | A | -0.2710 | |
| 64 | L | A | 0.0134 | |
| 65 | K | A | -1.6784 | |
| 66 | P | A | -1.1741 | |
| 67 | A | A | -1.2072 | |
| 68 | K | A | -2.1891 | |
| 69 | S | A | -1.2868 | |
| 70 | A | A | -0.4918 |