| Chain sequence(s) |
A: CEAIYAAPKCRRDSDCPGACICRGNGYCGEAIYAAPFAR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.3474 | |
| 2 | E | A | -0.2804 | |
| 3 | A | A | 1.1001 | |
| 4 | I | A | 2.6795 | |
| 5 | Y | A | 2.2826 | |
| 6 | A | A | 1.0449 | |
| 7 | A | A | 0.6823 | |
| 8 | P | A | -0.3801 | |
| 9 | K | A | -2.3707 | |
| 10 | C | A | -2.8001 | |
| 11 | R | A | -3.5159 | |
| 12 | R | A | -3.8988 | |
| 13 | D | A | -3.0026 | |
| 14 | S | A | -2.1647 | |
| 15 | D | A | -2.4799 | |
| 16 | C | A | 0.0000 | |
| 17 | P | A | -0.8740 | |
| 18 | G | A | -0.5402 | |
| 19 | A | A | -0.3495 | |
| 20 | C | A | 0.0000 | |
| 21 | I | A | -0.8221 | |
| 22 | C | A | -1.9112 | |
| 23 | R | A | -1.6424 | |
| 24 | G | A | -1.1300 | |
| 25 | N | A | -1.7327 | |
| 26 | G | A | -1.7070 | |
| 27 | Y | A | -1.2182 | |
| 28 | C | A | 0.0000 | |
| 29 | G | A | 0.0000 | |
| 30 | E | A | 0.0000 | |
| 31 | A | A | 1.2712 | |
| 32 | I | A | 2.4775 | |
| 33 | Y | A | 1.6395 | |
| 34 | A | A | 1.0925 | |
| 35 | A | A | 1.1578 | |
| 36 | P | A | 0.8281 | |
| 37 | F | A | 1.7109 | |
| 38 | A | A | 0.2589 | |
| 39 | R | A | -0.9517 |