Project name: query_structure

Status: done

Started: 2026-03-16 22:58:08
Settings
Chain sequence(s) A: CEAIYAAPKCRRDSDCPGACICRGNGYCGEAIYAAPFAR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-3.8988
Maximal score value
2.6795
Average score
-0.4075
Total score value
-15.8938

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.3474
2 E A -0.2804
3 A A 1.1001
4 I A 2.6795
5 Y A 2.2826
6 A A 1.0449
7 A A 0.6823
8 P A -0.3801
9 K A -2.3707
10 C A -2.8001
11 R A -3.5159
12 R A -3.8988
13 D A -3.0026
14 S A -2.1647
15 D A -2.4799
16 C A 0.0000
17 P A -0.8740
18 G A -0.5402
19 A A -0.3495
20 C A 0.0000
21 I A -0.8221
22 C A -1.9112
23 R A -1.6424
24 G A -1.1300
25 N A -1.7327
26 G A -1.7070
27 Y A -1.2182
28 C A 0.0000
29 G A 0.0000
30 E A 0.0000
31 A A 1.2712
32 I A 2.4775
33 Y A 1.6395
34 A A 1.0925
35 A A 1.1578
36 P A 0.8281
37 F A 1.7109
38 A A 0.2589
39 R A -0.9517
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Laboratory of Theory of Biopolymers 2018