| Chain sequence(s) |
A: GPIASNPGPALKSTDEYVEETDLLYVAETDLLTETGNPTADVVENGKVVTPRVNALDWKVFLLKLPDPNTLPLPSSDFVDPSTERLIWRLRAFKIHVGGPLGKGTYGHPNFNALGDVDNPTAPVHETEDDTVNLSFRPKRRQLYIIGDEPPIGVYIAPAPPTPGLPPGAIPPTTKVHTIIEDGDRADIGFGARDYAALEPSKNEVPDIILDTKTVEPDIDGMKAEPTGRRLFTYDRYEKSYPVKRYVRDGPDPVPLPDAPPPSPLYTPPPASSPDAVLPSHRYFDLPDEGEITEEDLLFNKPVFLEKTEGLNNGVLWGNRLYVTVLDNSRAEIETKTTQLSTPAPNVYDPANYVTSRTYTREYQLSLIVQLCRIPLTPETLELLRRLDPRILEDWKLPFIPPVERPDPYAGKKFREIDLTNKLSTDLEKYELGRYYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.0389 | |
| 2 | P | A | 0.4481 | |
| 3 | I | A | 1.5651 | |
| 4 | A | A | 0.3725 | |
| 5 | S | A | -0.3629 | |
| 6 | N | A | -1.3098 | |
| 7 | P | A | -1.0769 | |
| 8 | G | A | -1.0294 | |
| 9 | P | A | -1.0363 | |
| 10 | A | A | -0.3294 | |
| 11 | L | A | -0.1745 | |
| 12 | K | A | -1.3381 | |
| 13 | S | A | -1.2461 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9883 | |
| 16 | E | A | -2.8667 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.9539 | |
| 20 | E | A | -3.1113 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.9547 | |
| 23 | L | A | -0.6473 | |
| 24 | L | A | -0.0722 | |
| 25 | Y | A | 0.0005 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9013 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2690 | |
| 31 | L | A | 0.3176 | |
| 32 | L | A | 0.0148 | |
| 33 | T | A | -0.2245 | |
| 34 | E | A | -0.5598 | |
| 35 | T | A | -0.4776 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -1.0794 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.6995 | |
| 40 | A | A | -0.4889 | |
| 41 | D | A | -0.6336 | |
| 42 | V | A | 0.8055 | |
| 43 | V | A | 0.8954 | |
| 44 | E | A | -1.4902 | |
| 45 | N | A | -2.0532 | |
| 46 | G | A | -1.3413 | |
| 47 | K | A | -1.2015 | |
| 48 | V | A | 1.1302 | |
| 49 | V | A | 1.3226 | |
| 50 | T | A | 0.6073 | |
| 51 | P | A | -0.1081 | |
| 52 | R | A | -0.8473 | |
| 53 | V | A | 0.0000 | |
| 54 | N | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0924 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2137 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.7542 | |
| 70 | T | A | -0.3657 | |
| 71 | L | A | -0.0624 | |
| 72 | P | A | -0.0599 | |
| 73 | L | A | 0.0434 | |
| 74 | P | A | -0.3068 | |
| 75 | S | A | -0.6962 | |
| 76 | S | A | -1.1819 | |
| 77 | D | A | -2.0463 | |
| 78 | F | A | -0.9711 | |
| 79 | V | A | -1.2508 | |
| 80 | D | A | -1.9492 | |
| 81 | P | A | -1.3119 | |
| 82 | S | A | -0.8726 | |
| 83 | T | A | -0.7916 | |
| 84 | E | A | -1.0282 | |
| 85 | R | A | -0.8257 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6337 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.8110 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.4408 | |
| 99 | G | A | -0.8031 | |
| 100 | P | A | -0.5950 | |
| 101 | L | A | -0.4144 | |
| 102 | G | A | -1.0654 | |
| 103 | K | A | -1.5215 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.6672 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9184 | |
| 108 | H | A | -1.4097 | |
| 109 | P | A | -1.4268 | |
| 110 | N | A | -2.1058 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.6102 | |
| 115 | G | A | -0.7239 | |
| 116 | D | A | -1.2988 | |
| 117 | V | A | -1.1035 | |
| 118 | D | A | -1.9585 | |
| 119 | N | A | -2.0658 | |
| 120 | P | A | -1.1401 | |
| 121 | T | A | -0.6175 | |
| 122 | A | A | -0.4194 | |
| 123 | P | A | -0.5952 | |
| 124 | V | A | -0.8275 | |
| 125 | H | A | -1.6276 | |
| 126 | E | A | -2.8817 | |
| 127 | T | A | -2.5661 | |
| 128 | E | A | -3.1428 | |
| 129 | D | A | -3.1446 | |
| 130 | D | A | -2.0861 | |
| 131 | T | A | -1.3403 | |
| 132 | V | A | -0.6159 | |
| 133 | N | A | -1.3878 | |
| 134 | L | A | -0.6736 | |
| 135 | S | A | -0.6113 | |
| 136 | F | A | 0.0000 | |
| 137 | R | A | -0.6316 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -0.9079 | |
| 140 | R | A | 0.0000 | |
| 141 | R | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | 0.0000 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.0137 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.4547 | |
| 155 | Y | A | -0.6855 | |
| 156 | I | A | -0.5290 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.2475 | |
| 159 | A | A | -0.4704 | |
| 160 | P | A | -0.4982 | |
| 161 | P | A | -0.4814 | |
| 162 | T | A | -0.3455 | |
| 163 | P | A | -0.4234 | |
| 164 | G | A | -0.3406 | |
| 165 | L | A | 0.4708 | |
| 166 | P | A | -0.0186 | |
| 167 | P | A | -0.2092 | |
| 168 | G | A | -0.0744 | |
| 169 | A | A | 0.6661 | |
| 170 | I | A | 1.7996 | |
| 171 | P | A | 0.6633 | |
| 172 | P | A | 0.1192 | |
| 173 | T | A | -0.2176 | |
| 174 | T | A | -0.8538 | |
| 175 | K | A | -1.5093 | |
| 176 | V | A | -0.7083 | |
| 177 | H | A | -0.9441 | |
| 178 | T | A | -0.3678 | |
| 179 | I | A | -0.2795 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2364 | |
| 182 | D | A | -1.4468 | |
| 183 | G | A | -0.8585 | |
| 184 | D | A | -0.8502 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5806 | |
| 190 | F | A | -0.2853 | |
| 191 | G | A | -0.3701 | |
| 192 | A | A | -0.6787 | |
| 193 | R | A | -1.0303 | |
| 194 | D | A | -0.9707 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3237 | |
| 197 | A | A | -0.4850 | |
| 198 | L | A | -0.3684 | |
| 199 | E | A | -1.2681 | |
| 200 | P | A | -1.1857 | |
| 201 | S | A | -1.2962 | |
| 202 | K | A | -2.6497 | |
| 203 | N | A | -1.7746 | |
| 204 | E | A | -1.2666 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6921 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.7543 | |
| 211 | D | A | -2.3002 | |
| 212 | T | A | -1.4399 | |
| 213 | K | A | -1.2438 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | E | A | -0.5001 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.0180 | |
| 219 | I | A | -1.1749 | |
| 220 | D | A | -2.3119 | |
| 221 | G | A | -1.6239 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.3332 | |
| 224 | A | A | -1.4771 | |
| 225 | E | A | -1.1233 | |
| 226 | P | A | -0.5348 | |
| 227 | T | A | -0.2981 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4174 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.8123 | |
| 234 | Y | A | -0.7759 | |
| 235 | D | A | -1.5615 | |
| 236 | R | A | -2.2847 | |
| 237 | Y | A | -1.6033 | |
| 238 | E | A | -2.1314 | |
| 239 | K | A | -2.0153 | |
| 240 | S | A | -0.8975 | |
| 241 | Y | A | -0.0327 | |
| 242 | P | A | -0.3843 | |
| 243 | V | A | -0.0332 | |
| 244 | K | A | -1.6317 | |
| 245 | R | A | -1.8845 | |
| 246 | Y | A | -0.9999 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5121 | |
| 249 | D | A | -1.4660 | |
| 250 | G | A | -1.2667 | |
| 251 | P | A | -0.6782 | |
| 252 | D | A | -0.3386 | |
| 253 | P | A | 0.5548 | |
| 254 | V | A | 1.4255 | |
| 255 | P | A | 0.2427 | |
| 256 | L | A | 0.4793 | |
| 257 | P | A | -0.4329 | |
| 258 | D | A | -1.6545 | |
| 259 | A | A | -0.8912 | |
| 260 | P | A | -0.9550 | |
| 261 | P | A | -0.6368 | |
| 262 | P | A | -0.3269 | |
| 263 | S | A | -0.1638 | |
| 264 | P | A | 0.3986 | |
| 265 | L | A | 1.3182 | |
| 266 | Y | A | 0.6456 | |
| 267 | T | A | 0.0836 | |
| 268 | P | A | -0.1124 | |
| 269 | P | A | -0.0914 | |
| 270 | P | A | -0.3293 | |
| 271 | A | A | -0.1039 | |
| 272 | S | A | -0.4666 | |
| 273 | S | A | -0.3315 | |
| 274 | P | A | -0.4872 | |
| 275 | D | A | -0.3528 | |
| 276 | A | A | 0.4330 | |
| 277 | V | A | 1.5215 | |
| 278 | L | A | 0.8016 | |
| 279 | P | A | -0.3466 | |
| 280 | S | A | -0.4522 | |
| 281 | H | A | -0.1318 | |
| 282 | R | A | -0.1199 | |
| 283 | Y | A | 0.4946 | |
| 284 | F | A | -0.3024 | |
| 285 | D | A | -1.3531 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -1.9881 | |
| 292 | I | A | -1.4160 | |
| 293 | T | A | -1.8770 | |
| 294 | E | A | -2.6828 | |
| 295 | E | A | -2.8591 | |
| 296 | D | A | -2.0922 | |
| 297 | L | A | -1.2487 | |
| 298 | L | A | -1.1845 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3015 | |
| 301 | K | A | -1.6211 | |
| 302 | P | A | -0.6382 | |
| 303 | V | A | -0.0269 | |
| 304 | F | A | -0.3923 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5713 | |
| 307 | K | A | -3.1003 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.3450 | |
| 310 | G | A | -1.3995 | |
| 311 | L | A | -0.7843 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -1.1795 | |
| 319 | N | A | -1.2036 | |
| 320 | R | A | -1.5144 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.7865 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.1455 | |
| 333 | I | A | -1.7988 | |
| 334 | E | A | -2.3942 | |
| 335 | T | A | -2.0967 | |
| 336 | K | A | -2.1293 | |
| 337 | T | A | -0.5442 | |
| 338 | T | A | 0.1631 | |
| 339 | Q | A | 0.5731 | |
| 340 | L | A | 1.5465 | |
| 341 | S | A | 0.4392 | |
| 342 | T | A | -0.0277 | |
| 343 | P | A | -0.3507 | |
| 344 | A | A | 0.0869 | |
| 345 | P | A | 0.0625 | |
| 346 | N | A | -0.2909 | |
| 347 | V | A | 1.5081 | |
| 348 | Y | A | 1.3871 | |
| 349 | D | A | -0.0959 | |
| 350 | P | A | 0.1939 | |
| 351 | A | A | 0.2304 | |
| 352 | N | A | 0.6620 | |
| 353 | Y | A | 0.9133 | |
| 354 | V | A | 1.2949 | |
| 355 | T | A | -0.2435 | |
| 356 | S | A | -1.0941 | |
| 357 | R | A | -1.8577 | |
| 358 | T | A | -1.5694 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7995 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.4445 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.5516 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.5988 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8613 | |
| 376 | L | A | -0.4907 | |
| 377 | T | A | -0.7764 | |
| 378 | P | A | -1.2081 | |
| 379 | E | A | -2.2768 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.3192 | |
| 382 | E | A | -2.1133 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.7500 | |
| 386 | R | A | -1.9369 | |
| 387 | L | A | -1.1046 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.6611 | |
| 390 | R | A | -1.9674 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | E | A | -2.3436 | |
| 394 | D | A | -2.7688 | |
| 395 | W | A | -1.9419 | |
| 396 | K | A | -1.9608 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2678 | |
| 399 | F | A | 1.6636 | |
| 400 | I | A | 0.8593 | |
| 401 | P | A | 0.0892 | |
| 402 | P | A | -0.7935 | |
| 403 | V | A | -0.6854 | |
| 404 | E | A | -2.5904 | |
| 405 | R | A | -2.8789 | |
| 406 | P | A | -2.0500 | |
| 407 | D | A | -2.1879 | |
| 408 | P | A | -1.2432 | |
| 409 | Y | A | -0.9198 | |
| 410 | A | A | -1.1143 | |
| 411 | G | A | -1.3541 | |
| 412 | K | A | -1.9437 | |
| 413 | K | A | -2.5896 | |
| 414 | F | A | -1.7334 | |
| 415 | R | A | -1.7978 | |
| 416 | E | A | -2.7933 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.8645 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5059 | |
| 421 | N | A | -1.7477 | |
| 422 | K | A | -1.5378 | |
| 423 | L | A | -0.4716 | |
| 424 | S | A | -0.6034 | |
| 425 | T | A | -0.6220 | |
| 426 | D | A | -1.8059 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.3974 | |
| 429 | K | A | -3.2504 | |
| 430 | Y | A | -2.1954 | |
| 431 | E | A | -2.1262 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.8620 | |
| 435 | Y | A | -1.0059 | |
| 436 | Y | A | -0.6237 | |
| 437 | L | A | -0.5274 | |
| 438 | N | A | -1.8844 | |
| 439 | R | A | -1.9721 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine