Project name: query_structure

Status: done

Started: 2026-03-16 23:27:13
Settings
Chain sequence(s) A: GLPVCGETCTLGTCYTQGCTCSWPICKRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-1.7994
Maximal score value
1.5955
Average score
0.1936
Total score value
5.6141

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8615
2 L A 0.4431
3 P A 0.4448
4 V A 1.3841
5 C A 0.3981
6 G A 0.0671
7 E A 0.0404
8 T A 0.5508
9 C A 0.0000
10 T A 1.0544
11 L A 1.5955
12 G A 0.7243
13 T A 0.8630
14 C A 0.5776
15 Y A 0.9082
16 T A -0.1739
17 Q A -1.4712
18 G A -1.4572
19 C A -0.7857
20 T A -0.2231
21 C A 0.8699
22 S A 0.7297
23 W A 1.5704
24 P A 1.0695
25 I A 1.1746
26 C A 0.0000
27 K A -0.5381
28 R A -1.5413
29 N A -1.7994
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Laboratory of Theory of Biopolymers 2018