| Chain sequence(s) |
A: DKKLKKKWLEEYLREFEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -3.5927 | |
| 2 | K | A | -4.1267 | |
| 3 | K | A | -3.9155 | |
| 4 | L | A | -2.9893 | |
| 5 | K | A | -3.6818 | |
| 6 | K | A | -3.3745 | |
| 7 | K | A | -2.8300 | |
| 8 | W | A | -0.9425 | |
| 9 | L | A | -0.7202 | |
| 10 | E | A | -1.7980 | |
| 11 | E | A | -2.3683 | |
| 12 | Y | A | -0.4103 | |
| 13 | L | A | -1.4507 | |
| 14 | R | A | -3.1262 | |
| 15 | E | A | -2.5348 | |
| 16 | F | A | -0.6556 | |
| 17 | E | A | -2.5154 | |
| 18 | K | A | -2.9804 |