Project name: query_structure

Status: done

Started: 2026-03-16 21:40:58
Settings
Chain sequence(s) A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFPIRYIETLIWGEAIWLYVPGSERSYDLTGLKPGTEYTVVISGVKGGESSYPLIAAFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.9904
Maximal score value
2.8294
Average score
-0.4037
Total score value
-36.3336

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9419
2 L A 0.3763
3 P A 0.1275
4 A A 0.0719
5 P A 0.0000
6 K A -2.0795
7 N A -1.4750
8 L A 0.1862
9 V A 1.1159
10 V A 0.3136
11 S A -0.5950
12 R A -1.9413
13 I A -0.8400
14 T A -1.6860
15 E A -2.9904
16 D A -2.7023
17 S A -2.0364
18 A A 0.0000
19 R A -1.2483
20 L A 0.0000
21 S A -0.3790
22 W A 0.0000
23 T A -1.2894
24 A A -1.3797
25 P A -1.3975
26 D A -2.2407
27 A A -1.4333
28 A A -1.1756
29 F A 0.0000
30 D A -2.7276
31 S A -0.9830
32 F A 0.0000
33 P A 0.0000
34 I A 0.0000
35 R A 0.3488
36 Y A 0.2821
37 I A 0.0000
38 E A 0.3587
39 T A 1.1535
40 L A 2.4895
41 I A 2.8294
42 W A 2.0334
43 G A 0.7246
44 E A -1.0101
45 A A -0.1423
46 I A 0.8498
47 W A 1.4856
48 L A 1.5218
49 Y A 1.5976
50 V A 0.0000
51 P A -0.6933
52 G A 0.0000
53 S A -1.4716
54 E A -1.4342
55 R A -0.9672
56 S A -0.5940
57 Y A -0.5895
58 D A -1.7186
59 L A 0.0000
60 T A -1.3561
61 G A -1.5030
62 L A 0.0000
63 K A -2.9684
64 P A -2.5204
65 G A -1.7771
66 T A 0.0000
67 E A -0.8341
68 Y A 0.0000
69 T A 0.2022
70 V A 0.0000
71 V A 0.0000
72 I A 0.0000
73 S A 0.7106
74 G A 0.0000
75 V A -1.2187
76 K A -2.3535
77 G A -2.0015
78 G A -2.0470
79 E A -2.3867
80 S A -0.7699
81 S A 0.0000
82 Y A 1.7344
83 P A 0.9021
84 L A 1.0967
85 I A 2.2689
86 A A 1.2667
87 A A 0.4344
88 F A 0.0000
89 T A -1.0281
90 T A -1.7724
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Laboratory of Theory of Biopolymers 2018