| Chain sequence(s) |
A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFPIRYIETLIWGEAIWLYVPGSERSYDLTGLKPGTEYTVVISGVKGGESSYPLIAAFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9419 | |
| 2 | L | A | 0.3763 | |
| 3 | P | A | 0.1275 | |
| 4 | A | A | 0.0719 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0795 | |
| 7 | N | A | -1.4750 | |
| 8 | L | A | 0.1862 | |
| 9 | V | A | 1.1159 | |
| 10 | V | A | 0.3136 | |
| 11 | S | A | -0.5950 | |
| 12 | R | A | -1.9413 | |
| 13 | I | A | -0.8400 | |
| 14 | T | A | -1.6860 | |
| 15 | E | A | -2.9904 | |
| 16 | D | A | -2.7023 | |
| 17 | S | A | -2.0364 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2483 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3790 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2894 | |
| 24 | A | A | -1.3797 | |
| 25 | P | A | -1.3975 | |
| 26 | D | A | -2.2407 | |
| 27 | A | A | -1.4333 | |
| 28 | A | A | -1.1756 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.7276 | |
| 31 | S | A | -0.9830 | |
| 32 | F | A | 0.0000 | |
| 33 | P | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | 0.3488 | |
| 36 | Y | A | 0.2821 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | 0.3587 | |
| 39 | T | A | 1.1535 | |
| 40 | L | A | 2.4895 | |
| 41 | I | A | 2.8294 | |
| 42 | W | A | 2.0334 | |
| 43 | G | A | 0.7246 | |
| 44 | E | A | -1.0101 | |
| 45 | A | A | -0.1423 | |
| 46 | I | A | 0.8498 | |
| 47 | W | A | 1.4856 | |
| 48 | L | A | 1.5218 | |
| 49 | Y | A | 1.5976 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6933 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.4716 | |
| 54 | E | A | -1.4342 | |
| 55 | R | A | -0.9672 | |
| 56 | S | A | -0.5940 | |
| 57 | Y | A | -0.5895 | |
| 58 | D | A | -1.7186 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3561 | |
| 61 | G | A | -1.5030 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9684 | |
| 64 | P | A | -2.5204 | |
| 65 | G | A | -1.7771 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -0.8341 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | 0.2022 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | 0.7106 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.2187 | |
| 76 | K | A | -2.3535 | |
| 77 | G | A | -2.0015 | |
| 78 | G | A | -2.0470 | |
| 79 | E | A | -2.3867 | |
| 80 | S | A | -0.7699 | |
| 81 | S | A | 0.0000 | |
| 82 | Y | A | 1.7344 | |
| 83 | P | A | 0.9021 | |
| 84 | L | A | 1.0967 | |
| 85 | I | A | 2.2689 | |
| 86 | A | A | 1.2667 | |
| 87 | A | A | 0.4344 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.0281 | |
| 90 | T | A | -1.7724 |