Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCVASGSIFGMSFMNWYRQAPGKEREWVGTISKSGVTSYADSVKGRFTISRDNAKNSMYLQMNSLRAEDTAVYYCNLPRPVMDYWGKGTTVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42) [INFO] Main: Simulation completed successfully. (00:00:43) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.7442 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.3203 | |
4 | L | H | 0.0000 | |
5 | V | H | 1.1043 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.2624 | |
8 | G | H | -0.9619 | |
9 | G | H | -0.3425 | |
11 | G | H | 0.3059 | |
12 | L | H | 1.2452 | |
13 | V | H | 0.0500 | |
14 | Q | H | -1.2607 | |
15 | P | H | -1.3786 | |
16 | G | H | -1.3221 | |
17 | G | H | -0.8762 | |
18 | S | H | -0.8859 | |
19 | L | H | -0.6276 | |
20 | R | H | -1.5847 | |
21 | L | H | 0.0000 | |
22 | S | H | 0.0072 | |
23 | C | H | 0.0000 | |
24 | V | H | 0.9756 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.5807 | |
27 | G | H | -0.8114 | |
28 | S | H | -0.2910 | |
29 | I | H | 0.0000 | |
30 | F | H | 0.7950 | |
35 | G | H | 0.2208 | |
36 | M | H | 0.0000 | |
37 | S | H | -0.5805 | |
38 | F | H | 0.2341 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | Y | H | 0.1753 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.1641 | |
45 | A | H | -1.2914 | |
46 | P | H | -1.0391 | |
47 | G | H | -1.4739 | |
48 | K | H | -2.2452 | |
49 | E | H | -2.7706 | |
50 | R | H | -1.7982 | |
51 | E | H | -1.1979 | |
52 | W | H | -0.0717 | |
53 | V | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | T | H | 0.5486 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0063 | |
58 | K | H | -1.2511 | |
59 | S | H | -0.5250 | |
63 | G | H | -0.1481 | |
64 | V | H | 1.3531 | |
65 | T | H | 0.6205 | |
66 | S | H | -0.1780 | |
67 | Y | H | -0.8705 | |
68 | A | H | -1.2614 | |
69 | D | H | -2.4576 | |
70 | S | H | -1.8894 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.5241 | |
74 | G | H | -1.6884 | |
75 | R | H | -1.6282 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.7958 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.2992 | |
80 | R | H | -1.2408 | |
81 | D | H | -1.5856 | |
82 | N | H | -1.9917 | |
83 | A | H | -1.3916 | |
84 | K | H | -2.0332 | |
85 | N | H | -1.1484 | |
86 | S | H | 0.0000 | |
87 | M | H | 0.0000 | |
88 | Y | H | -0.2452 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.0715 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.2532 | |
93 | S | H | -1.1465 | |
94 | L | H | 0.0000 | |
95 | R | H | -1.9877 | |
96 | A | H | -1.5249 | |
97 | E | H | -2.1165 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.5087 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.1313 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.1902 | |
104 | C | H | 0.0000 | |
105 | N | H | 0.0000 | |
106 | L | H | 0.0000 | |
107 | P | H | -0.1821 | |
108 | R | H | -1.1904 | |
109 | P | H | -0.0930 | |
114 | V | H | 1.3656 | |
115 | M | H | 1.0188 | |
116 | D | H | -0.5442 | |
117 | Y | H | -0.2403 | |
118 | W | H | 0.3072 | |
119 | G | H | -0.1230 | |
120 | K | H | -1.2741 | |
121 | G | H | 0.0000 | |
122 | T | H | -0.2417 | |
123 | T | H | 0.1750 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.0513 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5209 | |
128 | S | H | -0.8005 |