| Chain sequence(s) |
A: LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNNNC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23)
[INFO] Main: Simulation completed successfully. (00:03:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.9192 | |
| 2 | P | A | 1.4120 | |
| 3 | I | A | 2.2858 | |
| 4 | C | A | 0.7994 | |
| 5 | P | A | 0.0896 | |
| 6 | G | A | -0.5292 | |
| 7 | G | A | -0.8883 | |
| 8 | A | A | -1.0218 | |
| 9 | A | A | -1.0082 | |
| 10 | R | A | -1.7874 | |
| 11 | C | A | -0.7279 | |
| 12 | Q | A | -0.2809 | |
| 13 | V | A | 1.0246 | |
| 14 | T | A | -0.0081 | |
| 15 | L | A | -0.5425 | |
| 16 | R | A | -1.8577 | |
| 17 | D | A | -1.3852 | |
| 18 | L | A | -0.9187 | |
| 19 | F | A | 0.0000 | |
| 20 | D | A | -1.9083 | |
| 21 | R | A | -1.9953 | |
| 22 | A | A | 0.0000 | |
| 23 | V | A | -0.2213 | |
| 24 | V | A | 0.9506 | |
| 25 | L | A | 0.2999 | |
| 26 | S | A | 0.0000 | |
| 27 | H | A | -0.1886 | |
| 28 | Y | A | 0.5902 | |
| 29 | I | A | 0.0000 | |
| 30 | H | A | -1.8658 | |
| 31 | N | A | -2.0306 | |
| 32 | L | A | 0.0000 | |
| 33 | S | A | 0.0000 | |
| 34 | S | A | -2.1883 | |
| 35 | E | A | -2.7464 | |
| 36 | M | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | S | A | -2.3275 | |
| 39 | E | A | -2.5371 | |
| 40 | F | A | 0.0000 | |
| 41 | D | A | -2.3817 | |
| 42 | K | A | -3.3196 | |
| 43 | R | A | -3.0786 | |
| 44 | Y | A | -2.2729 | |
| 45 | T | A | 0.0000 | |
| 46 | H | A | -2.7391 | |
| 47 | G | A | -1.4922 | |
| 48 | R | A | -1.1614 | |
| 49 | G | A | -0.1994 | |
| 50 | F | A | 0.9931 | |
| 51 | I | A | 0.0463 | |
| 52 | T | A | -0.2633 | |
| 53 | K | A | -1.1639 | |
| 54 | A | A | -0.7617 | |
| 55 | I | A | -0.6271 | |
| 56 | N | A | -1.7151 | |
| 57 | S | A | -0.9471 | |
| 58 | C | A | 0.0000 | |
| 59 | H | A | -0.3852 | |
| 60 | T | A | 0.0000 | |
| 61 | S | A | -0.7901 | |
| 62 | S | A | -0.0696 | |
| 63 | L | A | 0.3738 | |
| 64 | A | A | -0.4030 | |
| 65 | T | A | -0.9758 | |
| 66 | P | A | 0.0000 | |
| 67 | E | A | -3.3276 | |
| 68 | D | A | -4.1660 | |
| 69 | K | A | -4.2508 | |
| 70 | E | A | -4.4026 | |
| 71 | Q | A | -4.0811 | |
| 72 | A | A | -3.7371 | |
| 73 | Q | A | -3.6593 | |
| 74 | Q | A | -3.3416 | |
| 75 | M | A | -2.7664 | |
| 76 | N | A | -2.8492 | |
| 77 | Q | A | -2.7666 | |
| 78 | K | A | -2.1572 | |
| 79 | D | A | -2.1012 | |
| 80 | F | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | S | A | -0.8828 | |
| 83 | L | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | S | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -0.3234 | |
| 90 | S | A | 0.3441 | |
| 91 | W | A | 0.0000 | |
| 92 | N | A | -1.2936 | |
| 93 | E | A | -0.8691 | |
| 94 | P | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | Y | A | 0.5935 | |
| 97 | H | A | -0.0418 | |
| 98 | L | A | 0.0000 | |
| 99 | V | A | -0.4279 | |
| 100 | T | A | -0.4664 | |
| 101 | E | A | -1.1051 | |
| 102 | V | A | 0.0000 | |
| 103 | R | A | -2.8228 | |
| 104 | G | A | -2.1618 | |
| 105 | M | A | -2.1800 | |
| 106 | Q | A | -2.7576 | |
| 107 | E | A | -3.0323 | |
| 108 | A | A | 0.0000 | |
| 109 | P | A | -2.5608 | |
| 110 | E | A | -2.6125 | |
| 111 | A | A | -1.5123 | |
| 112 | I | A | 0.0000 | |
| 113 | L | A | -1.3158 | |
| 114 | S | A | -1.1316 | |
| 115 | K | A | -1.7020 | |
| 116 | A | A | 0.0000 | |
| 117 | V | A | -0.8507 | |
| 118 | E | A | -1.7024 | |
| 119 | I | A | 0.0000 | |
| 120 | E | A | -1.7929 | |
| 121 | E | A | -2.6678 | |
| 122 | Q | A | -1.9166 | |
| 123 | T | A | 0.0000 | |
| 124 | K | A | -3.0525 | |
| 125 | R | A | -3.5217 | |
| 126 | L | A | 0.0000 | |
| 127 | L | A | 0.0000 | |
| 128 | E | A | -2.7824 | |
| 129 | G | A | 0.0000 | |
| 130 | M | A | 0.0000 | |
| 131 | E | A | -2.1001 | |
| 132 | L | A | -0.6055 | |
| 133 | I | A | 0.0000 | |
| 134 | V | A | 0.0000 | |
| 135 | S | A | -1.8712 | |
| 136 | Q | A | -1.3145 | |
| 137 | V | A | -0.4166 | |
| 138 | H | A | -1.5548 | |
| 139 | P | A | -2.0360 | |
| 140 | E | A | -2.8867 | |
| 141 | T | A | -2.8641 | |
| 142 | K | A | -3.4900 | |
| 143 | E | A | -3.3870 | |
| 144 | N | A | -2.1375 | |
| 145 | E | A | -0.9233 | |
| 146 | I | A | 1.7885 | |
| 147 | Y | A | 2.0251 | |
| 148 | P | A | 1.6229 | |
| 149 | V | A | 1.9822 | |
| 150 | W | A | 0.7653 | |
| 151 | S | A | 0.1572 | |
| 152 | G | A | -0.0814 | |
| 153 | L | A | -0.2568 | |
| 154 | P | A | -0.3947 | |
| 155 | S | A | -0.5157 | |
| 156 | L | A | -0.5468 | |
| 157 | Q | A | -1.3570 | |
| 158 | M | A | -1.3181 | |
| 159 | A | A | -1.5627 | |
| 160 | D | A | -2.9143 | |
| 161 | E | A | -2.6805 | |
| 162 | E | A | -2.3482 | |
| 163 | S | A | -1.8480 | |
| 164 | R | A | -1.6981 | |
| 165 | L | A | 0.0000 | |
| 166 | S | A | -0.4969 | |
| 167 | A | A | 0.0000 | |
| 168 | Y | A | 0.0000 | |
| 169 | Y | A | 0.0000 | |
| 170 | N | A | -0.6498 | |
| 171 | L | A | 0.0000 | |
| 172 | L | A | 0.0000 | |
| 173 | H | A | -1.3347 | |
| 174 | C | A | 0.0000 | |
| 175 | L | A | 0.0000 | |
| 176 | R | A | -2.7355 | |
| 177 | R | A | -2.9686 | |
| 178 | D | A | 0.0000 | |
| 179 | S | A | 0.0000 | |
| 180 | H | A | -2.1686 | |
| 181 | K | A | -1.6877 | |
| 182 | I | A | 0.0000 | |
| 183 | D | A | 0.0000 | |
| 184 | N | A | -1.0030 | |
| 185 | Y | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | K | A | -1.2672 | |
| 188 | L | A | -0.8491 | |
| 189 | L | A | -0.9202 | |
| 190 | K | A | -1.7927 | |
| 191 | C | A | -2.0017 | |
| 192 | R | A | -2.5043 | |
| 193 | I | A | -1.2924 | |
| 194 | I | A | -1.4576 | |
| 195 | H | A | -2.4309 | |
| 196 | N | A | -2.8347 | |
| 197 | N | A | -2.5447 | |
| 198 | N | A | -1.7336 | |
| 199 | C | A | -0.5908 |