| Chain sequence(s) |
A: MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRWGRGFGLVEHVLGQDSILNQSNSIFGCIFYTLQLLLGCLRTRWASVLMLLSSLVSLAGSVYLAWILFFVLYDFCIVCITTYAINVSLMWLSFRKVQEPQGKAKRH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | TH99A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.954473 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:24)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:28)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:07)
[INFO] Main: Simulation completed successfully. (00:02:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9691 | |
| 2 | G | A | -0.3146 | |
| 3 | S | A | -0.3047 | |
| 4 | T | A | 0.1357 | |
| 5 | W | A | 1.1416 | |
| 6 | G | A | -0.1587 | |
| 7 | S | A | -0.2832 | |
| 8 | P | A | -0.1020 | |
| 9 | G | A | 0.0378 | |
| 10 | W | A | 1.4390 | |
| 11 | V | A | 1.7856 | |
| 12 | R | A | 0.0000 | |
| 13 | L | A | 0.4950 | |
| 14 | A | A | 0.1453 | |
| 15 | L | A | 0.2259 | |
| 16 | C | A | 0.0000 | |
| 17 | L | A | 0.7711 | |
| 18 | T | A | 0.0938 | |
| 19 | G | A | 0.0000 | |
| 20 | L | A | 0.7124 | |
| 21 | V | A | 1.8716 | |
| 22 | L | A | 0.5739 | |
| 23 | S | A | 0.0000 | |
| 24 | L | A | 0.7902 | |
| 25 | Y | A | 0.2990 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | 0.3008 | |
| 28 | H | A | -0.8791 | |
| 29 | V | A | 0.0000 | |
| 30 | K | A | -0.2614 | |
| 31 | A | A | -0.0271 | |
| 32 | A | A | -0.0740 | |
| 33 | R | A | -0.6828 | |
| 34 | A | A | -0.3642 | |
| 35 | R | A | -2.1597 | |
| 36 | D | A | -2.5111 | |
| 37 | R | A | -2.4896 | |
| 38 | D | A | -2.0695 | |
| 39 | Y | A | -0.3710 | |
| 40 | R | A | -1.7926 | |
| 41 | A | A | 0.0000 | |
| 42 | L | A | 1.5477 | |
| 43 | C | A | 0.0000 | |
| 44 | D | A | 0.0000 | |
| 45 | V | A | 1.7299 | |
| 46 | G | A | 0.1091 | |
| 47 | T | A | -0.1036 | |
| 48 | A | A | 0.1141 | |
| 49 | I | A | 0.5533 | |
| 50 | S | A | 0.0433 | |
| 51 | C | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | R | A | -1.0297 | |
| 54 | V | A | 0.0211 | |
| 55 | F | A | 0.1910 | |
| 56 | S | A | -0.1814 | |
| 57 | S | A | -0.3970 | |
| 58 | R | A | -1.7962 | |
| 59 | W | A | 0.0003 | |
| 60 | G | A | -0.2949 | |
| 61 | R | A | -1.8558 | |
| 62 | G | A | 0.0000 | |
| 63 | F | A | 0.5001 | |
| 64 | G | A | 0.3200 | |
| 65 | L | A | 1.3333 | |
| 66 | V | A | 0.3682 | |
| 67 | E | A | -0.5322 | |
| 68 | H | A | -0.7131 | |
| 69 | V | A | 1.8413 | |
| 70 | L | A | 1.6554 | |
| 71 | G | A | -0.1694 | |
| 72 | Q | A | -1.5758 | |
| 73 | D | A | -2.0117 | |
| 74 | S | A | 0.0041 | |
| 75 | I | A | 2.1594 | |
| 76 | L | A | 1.2191 | |
| 77 | N | A | 0.0000 | |
| 78 | Q | A | -0.6130 | |
| 79 | S | A | -0.4448 | |
| 80 | N | A | -0.1884 | |
| 81 | S | A | 0.0234 | |
| 82 | I | A | 0.5433 | |
| 83 | F | A | 0.4682 | |
| 84 | G | A | 0.0164 | |
| 85 | C | A | 0.4387 | |
| 86 | I | A | 2.0699 | |
| 87 | F | A | 0.5918 | |
| 88 | Y | A | 0.0000 | |
| 89 | T | A | 0.0390 | |
| 90 | L | A | 0.5407 | |
| 91 | Q | A | 0.0000 | |
| 92 | L | A | 0.5278 | |
| 93 | L | A | 1.5936 | |
| 94 | L | A | 0.0000 | |
| 95 | G | A | 0.0053 | |
| 96 | C | A | 0.2177 | |
| 97 | L | A | 0.0347 | |
| 98 | R | A | -1.9347 | |
| 99 | H | A | -1.3575 | mutated: TH99A |
| 100 | R | A | -1.7719 | |
| 101 | W | A | 0.7375 | |
| 102 | A | A | 0.0000 | |
| 103 | S | A | 0.0000 | |
| 104 | V | A | 0.4529 | |
| 105 | L | A | 0.6409 | |
| 106 | M | A | 0.0000 | |
| 107 | L | A | 0.4082 | |
| 108 | L | A | 1.3217 | |
| 109 | S | A | 0.1997 | |
| 110 | S | A | 0.0000 | |
| 111 | L | A | 1.1804 | |
| 112 | V | A | 1.9233 | |
| 113 | S | A | 0.3366 | |
| 114 | L | A | 0.2631 | |
| 115 | A | A | 0.0919 | |
| 116 | G | A | -0.0617 | |
| 117 | S | A | 0.0000 | |
| 118 | V | A | 1.8314 | |
| 119 | Y | A | 0.6857 | |
| 120 | L | A | 0.2852 | |
| 121 | A | A | 0.2631 | |
| 122 | W | A | 1.1885 | |
| 123 | I | A | 0.0000 | |
| 124 | L | A | 0.0000 | |
| 125 | F | A | 1.7774 | |
| 126 | F | A | 2.2883 | |
| 127 | V | A | 1.0180 | |
| 128 | L | A | 0.5398 | |
| 129 | Y | A | 1.4815 | |
| 130 | D | A | 0.0000 | |
| 131 | F | A | 1.8630 | |
| 132 | C | A | 0.0000 | |
| 133 | I | A | 0.7716 | |
| 134 | V | A | 0.0000 | |
| 135 | C | A | 0.0000 | |
| 136 | I | A | 0.5731 | |
| 137 | T | A | 0.0667 | |
| 138 | T | A | 0.0104 | |
| 139 | Y | A | 0.1600 | |
| 140 | A | A | 0.0857 | |
| 141 | I | A | 0.0000 | |
| 142 | N | A | 0.0000 | |
| 143 | V | A | 0.9734 | |
| 144 | S | A | 0.0915 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | 0.0000 | |
| 147 | W | A | 1.2289 | |
| 148 | L | A | 0.4465 | |
| 149 | S | A | 0.0000 | |
| 150 | F | A | 1.2454 | |
| 151 | R | A | -1.6324 | |
| 152 | K | A | -0.5849 | |
| 153 | V | A | 0.5058 | |
| 154 | Q | A | -1.3828 | |
| 155 | E | A | -2.0797 | |
| 156 | P | A | -0.7915 | |
| 157 | Q | A | -1.3259 | |
| 158 | G | A | -0.9755 | |
| 159 | K | A | -1.7710 | |
| 160 | A | A | -0.5507 | |
| 161 | K | A | -2.0299 | |
| 162 | R | A | -2.3465 | |
| 163 | H | A | -1.3418 |