Project name: query_structure

Status: done

Started: 2026-03-16 23:24:38
Settings
Chain sequence(s) A: GIPCGESCVYIPCTVTALAGCKCKSKVCYN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:22)
Show buried residues

Minimal score value
-2.4066
Maximal score value
2.5652
Average score
0.0987
Total score value
2.9597

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2411
2 I A 1.3924
3 P A 0.0211
4 C A -0.0771
5 G A -0.4003
6 E A -0.1764
7 S A -0.0405
8 C A 0.4946
9 V A 1.2390
10 Y A 2.3681
11 I A 2.5652
12 P A 1.1451
13 C A 0.7209
14 T A 1.2424
15 V A 2.0810
16 T A 0.7415
17 A A 0.6166
18 L A 1.7620
19 A A 0.5432
20 G A -0.4584
21 C A 0.0000
22 K A -2.3102
23 C A -1.3479
24 K A -2.4066
25 S A -1.5832
26 K A -1.4682
27 V A -0.9596
28 C A 0.0000
29 Y A -1.0908
30 N A -1.4131
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Laboratory of Theory of Biopolymers 2018