| Chain sequence(s) |
A: FPRPRICNLACRAGIGHKYPFCHCR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.3600 | |
| 2 | P | A | -0.4643 | |
| 3 | R | A | -1.9452 | |
| 4 | P | A | -1.0365 | |
| 5 | R | A | -1.7695 | |
| 6 | I | A | 0.1486 | |
| 7 | C | A | 0.0000 | |
| 8 | N | A | -0.7919 | |
| 9 | L | A | 0.6598 | |
| 10 | A | A | 0.0000 | |
| 11 | C | A | -1.0170 | |
| 12 | R | A | -1.5136 | |
| 13 | A | A | -0.6499 | |
| 14 | G | A | -1.4037 | |
| 15 | I | A | -1.0716 | |
| 16 | G | A | 0.0000 | |
| 17 | H | A | -2.1582 | |
| 18 | K | A | -2.0132 | |
| 19 | Y | A | -0.1546 | |
| 20 | P | A | 0.0280 | |
| 21 | F | A | 1.4923 | |
| 22 | C | A | 0.0000 | |
| 23 | H | A | -1.3115 | |
| 24 | C | A | -1.4187 | |
| 25 | R | A | -2.6447 |