Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | ID93C,LA45C,YH95C,TP117C,LC11C,GA10C,GI113C,EL6C,VG5C,WE110C |
Energy difference between WT (input) and mutated protein (by FoldX) | 27.2057 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:01:06) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30) [INFO] Main: Simulation completed successfully. (00:01:30) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.0229 | |
2 | V | C | -1.2800 | |
3 | Q | C | -2.0431 | |
4 | L | C | 0.0000 | |
5 | G | C | -0.9783 | mutated: VG5C |
6 | L | C | -0.2578 | mutated: EL6C |
7 | S | C | -0.4598 | |
8 | G | C | -0.6643 | |
9 | G | C | -0.0132 | |
10 | A | C | 0.6725 | mutated: GA10C |
11 | C | C | 0.7304 | mutated: LC11C |
12 | V | C | -0.3624 | |
13 | Q | C | -1.5294 | |
14 | P | C | -1.5854 | |
15 | G | C | -1.4106 | |
16 | G | C | -1.0612 | |
17 | S | C | -1.2310 | |
18 | L | C | -1.0046 | |
19 | R | C | -2.1321 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.6531 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.6227 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.4044 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5417 | |
28 | T | C | 0.2492 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0325 | |
31 | S | C | -0.8863 | |
32 | Y | C | -1.2160 | |
33 | E | C | -1.0727 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -1.1810 | |
40 | A | C | -1.5142 | |
41 | P | C | -1.4591 | |
42 | G | C | -1.5733 | |
43 | K | C | -2.4386 | |
44 | G | C | -1.7123 | |
45 | A | C | -1.1047 | mutated: LA45C |
46 | E | C | -1.0384 | |
47 | W | C | 0.0133 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5831 | |
53 | G | C | -1.2447 | |
54 | S | C | -1.2286 | |
55 | G | C | -1.0817 | |
56 | G | C | -0.7345 | |
57 | S | C | -0.3025 | |
58 | T | C | 0.1989 | |
59 | Y | C | 0.6077 | |
60 | Y | C | -0.3561 | |
61 | A | C | -1.1377 | |
62 | D | C | -2.3439 | |
63 | S | C | -1.7142 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3844 | |
66 | G | C | -1.6174 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6722 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5624 | |
72 | R | C | -1.3626 | |
73 | D | C | -1.9805 | |
74 | N | C | -2.1901 | |
75 | S | C | -1.7905 | |
76 | K | C | -2.3148 | |
77 | N | C | -1.6456 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.6265 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2357 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3345 | |
85 | S | C | -1.2332 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4840 | |
88 | A | C | -1.9123 | |
89 | E | C | -2.3563 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.7516 | |
92 | A | C | 0.0000 | |
93 | D | C | -0.0363 | mutated: ID93C |
94 | Y | C | 0.0000 | |
95 | H | C | 0.0000 | mutated: YH95C |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -2.9584 | |
101 | D | C | -3.2300 | |
102 | G | C | -2.0087 | |
103 | F | C | -1.1470 | |
104 | N | C | -2.3440 | |
105 | K | C | -3.0430 | |
106 | G | C | -1.5852 | |
107 | F | C | -0.8106 | |
108 | D | C | -1.3447 | |
109 | Y | C | -1.2498 | |
110 | E | C | -1.9669 | mutated: WE110C |
111 | G | C | -1.5575 | |
112 | Q | C | -1.6452 | |
113 | I | C | -0.2704 | mutated: GI113C |
114 | T | C | 0.3898 | |
115 | L | C | 1.3001 | |
116 | V | C | 0.0000 | |
117 | P | C | -0.1102 | mutated: TP117C |
118 | V | C | 0.0000 | |
119 | S | C | -0.9921 | |
120 | S | C | -1.0922 |