| Chain sequence(s) |
A: AALAAYRTALAAVRAAAAAFMAAVRADLGDSPAVQALEALAAQLDATTAALVAALDARRWDEALALQAQVAALVAQQVAALDAIVAGLSAAAQAAYAALVAARAATAAAAAALVAAIRAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0963 | |
| 2 | A | A | 0.1674 | |
| 3 | L | A | 0.0319 | |
| 4 | A | A | -0.0836 | |
| 5 | A | A | -0.0938 | |
| 6 | Y | A | 0.0000 | |
| 7 | R | A | -0.7325 | |
| 8 | T | A | -0.3317 | |
| 9 | A | A | -0.2933 | |
| 10 | L | A | -0.4009 | |
| 11 | A | A | -0.5036 | |
| 12 | A | A | -0.3505 | |
| 13 | V | A | -0.2269 | |
| 14 | R | A | -1.2923 | |
| 15 | A | A | -0.4652 | |
| 16 | A | A | -0.0767 | |
| 17 | A | A | -0.1900 | |
| 18 | A | A | -0.1787 | |
| 19 | A | A | 0.0300 | |
| 20 | F | A | 0.0000 | |
| 21 | M | A | -0.1550 | |
| 22 | A | A | -0.2404 | |
| 23 | A | A | -0.3457 | |
| 24 | V | A | 0.0000 | |
| 25 | R | A | -1.4244 | |
| 26 | A | A | -0.8661 | |
| 27 | D | A | -1.2380 | |
| 28 | L | A | -0.7258 | |
| 29 | G | A | -1.5284 | |
| 30 | D | A | -2.4561 | |
| 31 | S | A | -1.4498 | |
| 32 | P | A | -1.1125 | |
| 33 | A | A | -0.8024 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -1.9631 | |
| 36 | A | A | -0.8892 | |
| 37 | L | A | 0.0000 | |
| 38 | E | A | -1.0564 | |
| 39 | A | A | -0.6296 | |
| 40 | L | A | -0.5307 | |
| 41 | A | A | -0.6373 | |
| 42 | A | A | -0.5576 | |
| 43 | Q | A | -0.9400 | |
| 44 | L | A | -0.6658 | |
| 45 | D | A | -1.0179 | |
| 46 | A | A | -0.4713 | |
| 47 | T | A | 0.0000 | |
| 48 | T | A | -0.2226 | |
| 49 | A | A | -0.0273 | |
| 50 | A | A | -0.0767 | |
| 51 | L | A | 0.0000 | |
| 52 | V | A | -0.3280 | |
| 53 | A | A | -0.6694 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -1.6846 | |
| 57 | A | A | -1.6719 | |
| 58 | R | A | -2.9345 | |
| 59 | R | A | -2.7573 | |
| 60 | W | A | -1.9246 | |
| 61 | D | A | -2.6113 | |
| 62 | E | A | -1.9022 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | -0.7245 | |
| 65 | A | A | -0.4973 | |
| 66 | L | A | -0.2731 | |
| 67 | Q | A | -0.2357 | |
| 68 | A | A | -0.0808 | |
| 69 | Q | A | -0.4964 | |
| 70 | V | A | 0.0000 | |
| 71 | A | A | -0.0691 | |
| 72 | A | A | -0.1013 | |
| 73 | L | A | -0.1298 | |
| 74 | V | A | 0.2929 | |
| 75 | A | A | 0.0500 | |
| 76 | Q | A | -0.6582 | |
| 77 | Q | A | -0.1651 | |
| 78 | V | A | 0.3668 | |
| 79 | A | A | -0.3589 | |
| 80 | A | A | -0.3655 | |
| 81 | L | A | 0.0000 | |
| 82 | D | A | -1.4505 | |
| 83 | A | A | -0.5511 | |
| 84 | I | A | -0.1974 | |
| 85 | V | A | -0.2641 | |
| 86 | A | A | -0.3791 | |
| 87 | G | A | -0.4246 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.4078 | |
| 90 | A | A | -0.1518 | |
| 91 | A | A | -0.1757 | |
| 92 | A | A | 0.0000 | |
| 93 | Q | A | -0.4185 | |
| 94 | A | A | 0.0055 | |
| 95 | A | A | 0.1764 | |
| 96 | Y | A | 0.3925 | |
| 97 | A | A | 0.3677 | |
| 98 | A | A | 0.4148 | |
| 99 | L | A | 0.0000 | |
| 100 | V | A | 1.0967 | |
| 101 | A | A | 0.5619 | |
| 102 | A | A | 0.2429 | |
| 103 | R | A | 0.1805 | |
| 104 | A | A | 0.3072 | |
| 105 | A | A | 0.2564 | |
| 106 | T | A | 0.1111 | |
| 107 | A | A | 0.1408 | |
| 108 | A | A | 0.1714 | |
| 109 | A | A | 0.1034 | |
| 110 | A | A | 0.0000 | |
| 111 | A | A | 0.2730 | |
| 112 | A | A | 0.1227 | |
| 113 | L | A | 0.0000 | |
| 114 | V | A | 0.1443 | |
| 115 | A | A | -0.1107 | |
| 116 | A | A | 0.0443 | |
| 117 | I | A | 0.0000 | |
| 118 | R | A | -1.2892 | |
| 119 | A | A | 0.0010 | |
| 120 | L | A | 1.0457 |