| Chain sequence(s) |
A: GPLPKNPEPELLPTSEYVTPTDLLFVAETDLITETGHPTADIVVDGKVVVPKVSAYDYDVYLLTLPDPNTLPLPSPDFLDPSTEIRIWQLKAYYIGVGGPLGKGTYGHPNFNRFGDVDNPTEYQHEGEDVTVNYSFTPKYKQEYVIGDEPPLGKYTALAEPEPGLPEGAPPPTKVVTSIIEHGDKADIGFGAKDYKALEPRKDDVPDIIKDTSTKVLDYEGMKAEPTGRRMFDYDKKEKSKASEHLVRAGPDLFPLPDAPPPSPLYVRPSPESPYAILPSYRYFDIPDGGEIKEEDLLFNKPIFLEKAPGLNNGILWNNRLYVTVLDNSRSEIKTIKTKIKTPKDNVYNDSYYVTSYEYTREYSLSFIVQLCRIPLTPETLALLERIDPRILVNANLPDIPPVERPDPLAGKKFRELDLTSKLSTDLEKYELGRLYLNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1993 | |
| 2 | P | A | -0.0836 | |
| 3 | L | A | 0.5234 | |
| 4 | P | A | -0.8962 | |
| 5 | K | A | -2.4619 | |
| 6 | N | A | -2.5732 | |
| 7 | P | A | -2.6332 | |
| 8 | E | A | -3.2105 | |
| 9 | P | A | -2.3747 | |
| 10 | E | A | -2.1342 | |
| 11 | L | A | -0.5548 | |
| 12 | L | A | 0.1377 | |
| 13 | P | A | -0.2877 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.0036 | |
| 16 | E | A | -1.6905 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.7511 | |
| 20 | P | A | -0.8283 | |
| 21 | T | A | -0.9730 | |
| 22 | D | A | -1.6180 | |
| 23 | L | A | -0.4764 | |
| 24 | L | A | -0.1112 | |
| 25 | F | A | -0.0564 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.6745 | |
| 29 | T | A | -1.4559 | |
| 30 | D | A | -1.2928 | |
| 31 | L | A | 0.3308 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | -0.2873 | |
| 34 | E | A | -0.4816 | |
| 35 | T | A | -0.4127 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2836 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.4063 | |
| 40 | A | A | -0.2809 | |
| 41 | D | A | 0.0746 | |
| 42 | I | A | 2.0622 | |
| 43 | V | A | 2.5870 | |
| 44 | V | A | 1.6803 | |
| 45 | D | A | -0.9708 | |
| 46 | G | A | -0.5309 | |
| 47 | K | A | -0.1406 | |
| 48 | V | A | 2.2636 | |
| 49 | V | A | 2.7945 | |
| 50 | V | A | 1.9744 | |
| 51 | P | A | 0.4664 | |
| 52 | K | A | -0.5256 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | -0.4411 | |
| 58 | Y | A | 0.0000 | |
| 59 | D | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2092 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.6066 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8005 | |
| 70 | T | A | -0.3235 | |
| 71 | L | A | 0.0939 | |
| 72 | P | A | -0.0201 | |
| 73 | L | A | 0.0220 | |
| 74 | P | A | -0.2559 | |
| 75 | S | A | -0.6534 | |
| 76 | P | A | -1.1959 | |
| 77 | D | A | -1.9791 | |
| 78 | F | A | -0.8339 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -1.9440 | |
| 81 | P | A | -1.1151 | |
| 82 | S | A | -0.8362 | |
| 83 | T | A | -0.7803 | |
| 84 | E | A | -0.9933 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.5849 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.3798 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.4397 | |
| 99 | G | A | -0.8655 | |
| 100 | P | A | -0.8567 | |
| 101 | L | A | -0.8167 | |
| 102 | G | A | -1.2490 | |
| 103 | K | A | -1.7896 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5693 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8002 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.3067 | |
| 110 | N | A | -1.9081 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.6334 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5436 | |
| 117 | V | A | -0.8679 | |
| 118 | D | A | -2.4638 | |
| 119 | N | A | -2.5468 | |
| 120 | P | A | -1.7648 | |
| 121 | T | A | -1.5906 | |
| 122 | E | A | -2.1739 | |
| 123 | Y | A | -0.5693 | |
| 124 | Q | A | -1.4648 | |
| 125 | H | A | -1.9519 | |
| 126 | E | A | -3.0707 | |
| 127 | G | A | -2.9954 | |
| 128 | E | A | -3.2140 | |
| 129 | D | A | -2.9551 | |
| 130 | V | A | -1.6319 | |
| 131 | T | A | -1.1073 | |
| 132 | V | A | -0.4704 | |
| 133 | N | A | -1.4046 | |
| 134 | Y | A | -0.7154 | |
| 135 | S | A | -0.4144 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.4306 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Y | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.3969 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1787 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.1026 | |
| 155 | Y | A | 0.0521 | |
| 156 | T | A | 0.2422 | |
| 157 | A | A | -0.0870 | |
| 158 | L | A | 0.1918 | |
| 159 | A | A | -1.0095 | |
| 160 | E | A | -2.4550 | |
| 161 | P | A | -1.9112 | |
| 162 | E | A | -2.4168 | |
| 163 | P | A | -1.3879 | |
| 164 | G | A | -0.8597 | |
| 165 | L | A | -0.3813 | |
| 166 | P | A | -0.8944 | |
| 167 | E | A | -1.9806 | |
| 168 | G | A | -1.1376 | |
| 169 | A | A | -0.3039 | |
| 170 | P | A | -0.3545 | |
| 171 | P | A | -0.5370 | |
| 172 | P | A | -0.9085 | |
| 173 | T | A | -0.4391 | |
| 174 | K | A | -0.4599 | |
| 175 | V | A | 1.2159 | |
| 176 | V | A | 0.7051 | |
| 177 | T | A | 0.1809 | |
| 178 | S | A | -0.0177 | |
| 179 | I | A | -0.3002 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2977 | |
| 182 | H | A | -1.4375 | |
| 183 | G | A | -0.9717 | |
| 184 | D | A | -0.8359 | |
| 185 | K | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6567 | |
| 190 | F | A | -0.1506 | |
| 191 | G | A | -0.2187 | |
| 192 | A | A | -0.1250 | |
| 193 | K | A | -0.5056 | |
| 194 | D | A | -1.0243 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -2.7912 | |
| 197 | A | A | -1.1243 | |
| 198 | L | A | -0.9268 | |
| 199 | E | A | -1.8511 | |
| 200 | P | A | -2.0272 | |
| 201 | R | A | -2.5498 | |
| 202 | K | A | -2.6991 | |
| 203 | D | A | 0.0000 | |
| 204 | D | A | -1.3389 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.1974 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | K | A | -2.1104 | |
| 211 | D | A | -2.2845 | |
| 212 | T | A | -1.4445 | |
| 213 | S | A | -1.0412 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0189 | |
| 217 | L | A | 0.0000 | |
| 218 | D | A | -0.9814 | |
| 219 | Y | A | -1.3634 | |
| 220 | E | A | -2.4630 | |
| 221 | G | A | -1.7079 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.4874 | |
| 224 | A | A | -1.5091 | |
| 225 | E | A | -1.2828 | |
| 226 | P | A | -0.5012 | |
| 227 | T | A | -0.2208 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5945 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.6211 | |
| 234 | Y | A | -0.5459 | |
| 235 | D | A | -1.5450 | |
| 236 | K | A | -2.2983 | |
| 237 | K | A | -2.3418 | |
| 238 | E | A | -2.5030 | |
| 239 | K | A | -2.4504 | |
| 240 | S | A | -1.9663 | |
| 241 | K | A | -2.3821 | |
| 242 | A | A | -1.6357 | |
| 243 | S | A | -1.2773 | |
| 244 | E | A | -1.8102 | |
| 245 | H | A | -1.4436 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.1091 | |
| 249 | A | A | -1.2643 | |
| 250 | G | A | -1.1017 | |
| 251 | P | A | -0.4138 | |
| 252 | D | A | 0.3820 | |
| 253 | L | A | 1.3753 | |
| 254 | F | A | 2.1038 | |
| 255 | P | A | 0.5515 | |
| 256 | L | A | 0.6261 | |
| 257 | P | A | -0.3805 | |
| 258 | D | A | -1.9299 | |
| 259 | A | A | -0.8839 | |
| 260 | P | A | -1.1372 | |
| 261 | P | A | -0.5346 | |
| 262 | P | A | -0.1345 | |
| 263 | S | A | -0.0060 | |
| 264 | P | A | 0.6925 | |
| 265 | L | A | 1.5198 | |
| 266 | Y | A | 1.3741 | |
| 267 | V | A | 1.3318 | |
| 268 | R | A | -0.2596 | |
| 269 | P | A | -0.0529 | |
| 270 | S | A | -0.7138 | |
| 271 | P | A | -0.9963 | |
| 272 | E | A | -1.8877 | |
| 273 | S | A | -0.5858 | |
| 274 | P | A | 0.3285 | |
| 275 | Y | A | 1.4505 | |
| 276 | A | A | 0.8533 | |
| 277 | I | A | 2.0949 | |
| 278 | L | A | 1.6417 | |
| 279 | P | A | 0.4643 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.7868 | |
| 282 | R | A | 0.3597 | |
| 283 | Y | A | 1.0605 | |
| 284 | F | A | 0.0743 | |
| 285 | D | A | -1.3860 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6281 | |
| 289 | G | A | 0.0000 | |
| 290 | G | A | -1.8513 | |
| 291 | E | A | -2.3045 | |
| 292 | I | A | -2.1945 | |
| 293 | K | A | -3.0676 | |
| 294 | E | A | -3.2987 | |
| 295 | E | A | -3.2339 | |
| 296 | D | A | -2.2959 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.3937 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2448 | |
| 301 | K | A | -1.6753 | |
| 302 | P | A | -0.5695 | |
| 303 | I | A | 0.1839 | |
| 304 | F | A | -0.1181 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5258 | |
| 307 | K | A | -2.7064 | |
| 308 | A | A | 0.0000 | |
| 309 | P | A | -1.2199 | |
| 310 | G | A | -0.8799 | |
| 311 | L | A | -0.0815 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.0954 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.5620 | |
| 319 | N | A | -0.5756 | |
| 320 | R | A | -0.7152 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.9255 | |
| 331 | S | A | 0.0000 | |
| 332 | E | A | -2.2931 | |
| 333 | I | A | -0.9658 | |
| 334 | K | A | -1.0891 | |
| 335 | T | A | -0.2810 | |
| 336 | I | A | 0.2951 | |
| 337 | K | A | -0.8099 | |
| 338 | T | A | -0.5302 | |
| 339 | K | A | -1.2070 | |
| 340 | I | A | 0.6349 | |
| 341 | K | A | -1.4064 | |
| 342 | T | A | -1.5946 | |
| 343 | P | A | -1.7108 | |
| 344 | K | A | -2.6101 | |
| 345 | D | A | -2.5003 | |
| 346 | N | A | -1.5868 | |
| 347 | V | A | 0.5487 | |
| 348 | Y | A | 0.6758 | |
| 349 | N | A | -1.0178 | |
| 350 | D | A | -1.8331 | |
| 351 | S | A | -0.8254 | |
| 352 | Y | A | -0.8933 | |
| 353 | Y | A | -0.1265 | |
| 354 | V | A | 0.7270 | |
| 355 | T | A | 0.1292 | |
| 356 | S | A | 0.4517 | |
| 357 | Y | A | 0.5569 | |
| 358 | E | A | -0.1866 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.8319 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.4338 | |
| 363 | Y | A | 0.0000 | |
| 364 | S | A | -0.2911 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | F | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4065 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.0451 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6540 | |
| 376 | L | A | -0.2890 | |
| 377 | T | A | -0.5925 | |
| 378 | P | A | -0.9428 | |
| 379 | E | A | -1.7951 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.4182 | |
| 382 | A | A | -1.0405 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -0.9191 | |
| 386 | R | A | -1.3302 | |
| 387 | I | A | -0.3161 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7097 | |
| 390 | R | A | -0.8775 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.8824 | |
| 394 | N | A | -1.2128 | |
| 395 | A | A | 0.0000 | |
| 396 | N | A | -1.7360 | |
| 397 | L | A | -1.2559 | |
| 398 | P | A | -1.3098 | |
| 399 | D | A | -1.9177 | |
| 400 | I | A | -0.6774 | |
| 401 | P | A | -0.4672 | |
| 402 | P | A | -0.4706 | |
| 403 | V | A | 0.6046 | |
| 404 | E | A | -1.4339 | |
| 405 | R | A | -1.3131 | |
| 406 | P | A | -1.0867 | |
| 407 | D | A | -1.0902 | |
| 408 | P | A | -0.7062 | |
| 409 | L | A | -0.7448 | |
| 410 | A | A | -0.8954 | |
| 411 | G | A | -1.3297 | |
| 412 | K | A | -1.9403 | |
| 413 | K | A | -2.6452 | |
| 414 | F | A | -1.7303 | |
| 415 | R | A | -1.7825 | |
| 416 | E | A | -2.5297 | |
| 417 | L | A | -1.8446 | |
| 418 | D | A | -2.4616 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.0256 | |
| 421 | S | A | -1.0447 | |
| 422 | K | A | -1.6426 | |
| 423 | L | A | -0.5932 | |
| 424 | S | A | -0.8866 | |
| 425 | T | A | -0.6189 | |
| 426 | D | A | -1.7880 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.2605 | |
| 429 | K | A | -3.3046 | |
| 430 | Y | A | -2.5438 | |
| 431 | E | A | -2.7494 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.4947 | |
| 435 | L | A | -0.8859 | |
| 436 | Y | A | 0.0000 | |
| 437 | L | A | -0.1738 | |
| 438 | N | A | -1.4549 | |
| 439 | K | A | -1.7703 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine