| Chain sequence(s) |
A: ADDDCLPRGSKCLGENKQCCKGTTCMFYANRCVGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -2.2193 | |
| 2 | D | A | -3.6811 | |
| 3 | D | A | -4.0037 | |
| 4 | D | A | -3.5075 | |
| 5 | C | A | -1.6892 | |
| 6 | L | A | -1.2642 | |
| 7 | P | A | -1.3915 | |
| 8 | R | A | -2.5649 | |
| 9 | G | A | -2.2361 | |
| 10 | S | A | -1.9125 | |
| 11 | K | A | -2.6020 | |
| 12 | C | A | 0.0000 | |
| 13 | L | A | 0.6445 | |
| 14 | G | A | -0.6968 | |
| 15 | E | A | -2.3029 | |
| 16 | N | A | -2.6787 | |
| 17 | K | A | -3.3709 | |
| 18 | Q | A | -3.1716 | |
| 19 | C | A | -1.8580 | |
| 20 | C | A | -1.3139 | |
| 21 | K | A | -2.1976 | |
| 22 | G | A | -0.6947 | |
| 23 | T | A | -0.2510 | |
| 24 | T | A | 0.0658 | |
| 25 | C | A | 0.0677 | |
| 26 | M | A | 1.1697 | |
| 27 | F | A | 2.3013 | |
| 28 | Y | A | 2.2368 | |
| 29 | A | A | 0.0000 | |
| 30 | N | A | -0.2363 | |
| 31 | R | A | -2.0444 | |
| 32 | C | A | 0.0000 | |
| 33 | V | A | -0.2673 | |
| 34 | G | A | 0.4911 | |
| 35 | V | A | 1.7530 |