Project name: query_structure

Status: done

Started: 2026-03-16 22:52:59
Settings
Chain sequence(s) A: ADDDCLPRGSKCLGENKQCCKGTTCMFYANRCVGV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-4.0037
Maximal score value
2.3013
Average score
-1.1265
Total score value
-39.4262

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -2.2193
2 D A -3.6811
3 D A -4.0037
4 D A -3.5075
5 C A -1.6892
6 L A -1.2642
7 P A -1.3915
8 R A -2.5649
9 G A -2.2361
10 S A -1.9125
11 K A -2.6020
12 C A 0.0000
13 L A 0.6445
14 G A -0.6968
15 E A -2.3029
16 N A -2.6787
17 K A -3.3709
18 Q A -3.1716
19 C A -1.8580
20 C A -1.3139
21 K A -2.1976
22 G A -0.6947
23 T A -0.2510
24 T A 0.0658
25 C A 0.0677
26 M A 1.1697
27 F A 2.3013
28 Y A 2.2368
29 A A 0.0000
30 N A -0.2363
31 R A -2.0444
32 C A 0.0000
33 V A -0.2673
34 G A 0.4911
35 V A 1.7530
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Laboratory of Theory of Biopolymers 2018