Project name: query_structure

Status: done

Started: 2026-03-16 21:42:45
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPAIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:33)
Show buried residues

Minimal score value
-3.0753
Maximal score value
1.5281
Average score
-0.6826
Total score value
-61.4307

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0577
2 L A 0.4048
3 P A -0.2083
4 A A -0.4926
5 P A 0.0000
6 K A -2.0387
7 N A -1.1930
8 L A 0.2791
9 V A 0.9948
10 V A 0.0468
11 S A -0.6017
12 R A -1.9964
13 V A -0.9970
14 T A -1.7889
15 E A -3.0753
16 D A -2.7888
17 S A -2.0912
18 A A 0.0000
19 R A -1.2040
20 L A 0.0000
21 S A -0.3775
22 W A 0.0000
23 T A -1.2933
24 A A -1.4254
25 P A -1.4094
26 D A -2.2759
27 A A -1.4467
28 A A -1.2002
29 F A 0.0000
30 D A -2.4841
31 S A 0.0000
32 F A 0.0000
33 N A -0.6276
34 I A 0.0000
35 A A 0.0000
36 Y A 0.4393
37 W A -0.2314
38 E A -0.7834
39 P A -0.4753
40 A A 0.4913
41 I A 1.3410
42 G A -0.0074
43 G A -0.4678
44 E A -1.3647
45 A A -0.1889
46 I A 0.9810
47 W A 0.9787
48 L A 0.0806
49 R A -1.6002
50 V A 0.0000
51 P A -1.5309
52 G A 0.0000
53 S A -1.6180
54 E A -1.5245
55 R A -1.1648
56 S A -0.6631
57 Y A -0.7409
58 D A -1.6488
59 L A 0.0000
60 T A -1.4368
61 G A -1.5113
62 L A 0.0000
63 K A -3.0392
64 P A -2.6182
65 G A -1.8812
66 T A -1.9001
67 E A -1.9782
68 Y A 0.0000
69 K A -0.9097
70 V A 0.0000
71 W A 0.9683
72 I A 0.0000
73 H A -0.2270
74 G A 0.0000
75 V A -1.3217
76 K A -1.8344
77 G A -1.4746
78 G A -1.1818
79 A A -0.6402
80 S A -0.3868
81 S A 0.0000
82 P A 0.2490
83 P A 0.2506
84 L A 0.8165
85 I A 1.5281
86 A A 0.2395
87 R A -1.6227
88 F A 0.0000
89 T A -1.6520
90 T A -1.9358
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Laboratory of Theory of Biopolymers 2018