| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGGSVSSGDYYWTWIRQSPGKGLEWIGHIYYSGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDRVTGAFDIWGQGTMVTVSS
L: DIQMTQSPSTLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYFCQHFDHLPLAFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7111 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.0556 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8938 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8737 | |
| 8 | G | H | -0.5494 | |
| 9 | P | H | -0.2184 | |
| 11 | G | H | 0.0855 | |
| 12 | L | H | 0.4858 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.4913 | |
| 15 | P | H | -1.1346 | |
| 16 | S | H | -1.1531 | |
| 17 | E | H | -1.5279 | |
| 18 | T | H | -1.1897 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9080 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6347 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1667 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.5400 | |
| 27 | G | H | -1.4625 | |
| 28 | G | H | -1.2021 | |
| 29 | S | H | -0.9118 | |
| 30 | V | H | 0.0000 | |
| 31 | S | H | -0.3635 | |
| 34 | S | H | -0.5652 | |
| 35 | G | H | -0.7409 | |
| 36 | D | H | -1.4006 | |
| 37 | Y | H | -0.2749 | |
| 38 | Y | H | 0.1603 | |
| 39 | W | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.3620 | |
| 45 | S | H | -0.6150 | |
| 46 | P | H | -0.9165 | |
| 47 | G | H | -1.1844 | |
| 48 | K | H | -1.6185 | |
| 49 | G | H | -1.1935 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6166 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | H | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.0372 | |
| 58 | Y | H | 0.1644 | |
| 59 | S | H | -0.3419 | |
| 63 | G | H | -0.7768 | |
| 64 | N | H | -1.3419 | |
| 65 | T | H | -0.7512 | |
| 66 | N | H | -0.7293 | |
| 67 | Y | H | -0.5292 | |
| 68 | N | H | -0.7581 | |
| 69 | P | H | -0.9802 | |
| 70 | S | H | -0.8437 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.0578 | |
| 74 | S | H | -1.2879 | |
| 75 | R | H | -1.3059 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -0.9683 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4220 | |
| 80 | I | H | -0.3919 | |
| 81 | D | H | -1.1631 | |
| 82 | T | H | -0.9537 | |
| 83 | S | H | -1.3054 | |
| 84 | K | H | -2.1093 | |
| 85 | T | H | -1.3290 | |
| 86 | Q | H | -1.2489 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5266 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.3985 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9896 | |
| 93 | S | H | -0.9118 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.4928 | |
| 96 | A | H | -0.1933 | |
| 97 | A | H | -0.1652 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2034 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.6329 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | R | H | -0.2889 | |
| 109 | V | H | 0.1267 | |
| 110 | T | H | 0.0234 | |
| 113 | G | H | 0.0000 | |
| 114 | A | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2734 | |
| 117 | I | H | -0.3900 | |
| 118 | W | H | -0.6638 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9496 | |
| 121 | G | H | -0.8518 | |
| 122 | T | H | -0.1858 | |
| 123 | M | H | 0.6897 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2212 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4644 | |
| 128 | S | H | -0.6041 | |
| 1 | D | L | -2.2136 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0281 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.1703 | |
| 6 | Q | L | -0.8221 | |
| 7 | S | L | -0.6489 | |
| 8 | P | L | -0.4665 | |
| 9 | S | L | -0.6889 | |
| 10 | T | L | -0.8780 | |
| 11 | L | L | -0.7770 | |
| 12 | S | L | -1.0870 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7879 | |
| 15 | V | L | 0.0292 | |
| 16 | G | L | -0.6159 | |
| 17 | D | L | -1.6662 | |
| 18 | R | L | -2.3079 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6114 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7672 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -2.2661 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9530 | |
| 27 | Q | L | -2.4058 | |
| 28 | D | L | -2.6443 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.1793 | |
| 37 | N | L | -0.9395 | |
| 38 | Y | L | -0.0758 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2425 | |
| 45 | K | L | -1.7161 | |
| 46 | P | L | -1.1820 | |
| 47 | G | L | -1.7044 | |
| 48 | K | L | -2.5947 | |
| 49 | A | L | -1.5497 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2047 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1348 | |
| 56 | D | L | -0.4849 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7096 | |
| 66 | N | L | -0.7599 | |
| 67 | L | L | 0.0226 | |
| 68 | E | L | -0.3490 | |
| 69 | T | L | -0.3062 | |
| 70 | G | L | -0.4154 | |
| 71 | V | L | -0.2274 | |
| 72 | P | L | -0.2992 | |
| 74 | S | L | -0.4012 | |
| 75 | R | L | -0.8386 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4392 | |
| 78 | G | L | -0.4160 | |
| 79 | S | L | -0.9077 | |
| 80 | G | L | -1.2626 | |
| 83 | S | L | -1.4388 | |
| 84 | G | L | -1.7483 | |
| 85 | T | L | -2.2498 | |
| 86 | D | L | -2.6533 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7565 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4092 | |
| 93 | S | L | -1.1606 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8436 | |
| 96 | P | L | -1.0379 | |
| 97 | E | L | -1.8026 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.6000 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8361 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | F | L | 0.2032 | |
| 108 | D | L | -0.8177 | |
| 109 | H | L | -0.7682 | |
| 114 | L | L | 0.2199 | |
| 115 | P | L | -0.1868 | |
| 116 | L | L | 0.0000 | |
| 117 | A | L | -0.6105 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0340 | |
| 121 | G | L | -0.7143 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4765 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.9318 | |
| 126 | I | L | -0.9802 | |
| 127 | K | L | -1.6958 |