| Chain sequence(s) |
A: MLGPLPADPGPALRPTTDYVEPTDLLCIAETDLITETGNPTADIVVNGKVLVPRVSAYQWRVFKLTLPDPNTFPLPSPDAVDFSTEILIWQLRAFYIKRFGPLGKGSYGHANFNKLGDVTNPTAPVHGTADDTVSYSFYPKLRQEYVIGCEPPIGVYTTKAAPCPGLPPGACPPTERKESLIEDGDMCDIGFGAKDFAELLPTKDDVPDIILDTVCKEIDYEGMKAEPTGDRMFTWDRYEKSYPSKNLVRDGPDLYPLPDAQPPSPLYTKPPPSSPHWIRPPYNYFTIPDAGEITESDLLFNKPVFLEQTPGLNHGICWGNTLYITVVDNSRAEIETKTTQISTPAPNVYNPANYITSKTYTRQYQLSLVVQLCRIPLTPETLAYLARRDPRFLVNARLPFIPPVTRPDPLAGHKFHEIDLTNRLSTNLSESELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6225 | |
| 2 | L | A | 2.0270 | |
| 3 | G | A | 0.7841 | |
| 4 | P | A | 0.6963 | |
| 5 | L | A | 1.2056 | |
| 6 | P | A | -0.1254 | |
| 7 | A | A | -0.6744 | |
| 8 | D | A | -1.9097 | |
| 9 | P | A | -1.4260 | |
| 10 | G | A | -1.3468 | |
| 11 | P | A | -0.8644 | |
| 12 | A | A | 0.0503 | |
| 13 | L | A | 0.4487 | |
| 14 | R | A | -0.4639 | |
| 15 | P | A | -0.5771 | |
| 16 | T | A | 0.0000 | |
| 17 | T | A | -1.3254 | |
| 18 | D | A | -2.1122 | |
| 19 | Y | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | E | A | -1.8923 | |
| 22 | P | A | -1.4043 | |
| 23 | T | A | -1.3233 | |
| 24 | D | A | -1.6929 | |
| 25 | L | A | -0.6478 | |
| 26 | L | A | -0.3352 | |
| 27 | C | A | 0.0000 | |
| 28 | I | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | E | A | -1.1559 | |
| 31 | T | A | 0.0000 | |
| 32 | D | A | -1.4226 | |
| 33 | L | A | 0.1659 | |
| 34 | I | A | 0.1412 | |
| 35 | T | A | -0.0938 | |
| 36 | E | A | -0.3511 | |
| 37 | T | A | -0.3095 | |
| 38 | G | A | 0.0000 | |
| 39 | N | A | -0.4991 | |
| 40 | P | A | 0.0000 | |
| 41 | T | A | -0.5183 | |
| 42 | A | A | -0.1471 | |
| 43 | D | A | 0.2751 | |
| 44 | I | A | 2.1629 | |
| 45 | V | A | 2.7431 | |
| 46 | V | A | 1.7878 | |
| 47 | N | A | -0.5306 | |
| 48 | G | A | -0.3175 | |
| 49 | K | A | -0.0073 | |
| 50 | V | A | 2.4205 | |
| 51 | L | A | 2.8033 | |
| 52 | V | A | 1.9271 | |
| 53 | P | A | 0.5506 | |
| 54 | R | A | -0.2741 | |
| 55 | V | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | A | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | Q | A | 0.0000 | |
| 60 | W | A | 0.0000 | |
| 61 | R | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | K | A | -1.4148 | |
| 65 | L | A | 0.0000 | |
| 66 | T | A | -1.1578 | |
| 67 | L | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | D | A | -0.6806 | |
| 70 | P | A | 0.0000 | |
| 71 | N | A | -0.5189 | |
| 72 | T | A | -0.2584 | |
| 73 | F | A | -0.2293 | |
| 74 | P | A | -0.2817 | |
| 75 | L | A | -0.3759 | |
| 76 | P | A | -0.5595 | |
| 77 | S | A | -0.9216 | |
| 78 | P | A | -1.2176 | |
| 79 | D | A | -2.0250 | |
| 80 | A | A | -1.0347 | |
| 81 | V | A | -0.9001 | |
| 82 | D | A | -1.1953 | |
| 83 | F | A | 0.3893 | |
| 84 | S | A | -0.0013 | |
| 85 | T | A | -0.1902 | |
| 86 | E | A | -0.2329 | |
| 87 | I | A | -0.1419 | |
| 88 | L | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | W | A | 0.0000 | |
| 91 | Q | A | -0.3793 | |
| 92 | L | A | 0.0000 | |
| 93 | R | A | -0.7623 | |
| 94 | A | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | K | A | -0.4783 | |
| 99 | R | A | 0.0000 | |
| 100 | F | A | 0.5657 | |
| 101 | G | A | -0.3008 | |
| 102 | P | A | -0.4107 | |
| 103 | L | A | -0.3310 | |
| 104 | G | A | -1.1057 | |
| 105 | K | A | -1.4351 | |
| 106 | G | A | 0.0000 | |
| 107 | S | A | -0.3527 | |
| 108 | Y | A | 0.0000 | |
| 109 | G | A | -0.5076 | |
| 110 | H | A | -0.9420 | |
| 111 | A | A | -0.7197 | |
| 112 | N | A | -1.8037 | |
| 113 | F | A | 0.0000 | |
| 114 | N | A | -1.2845 | |
| 115 | K | A | -0.7581 | |
| 116 | L | A | -0.5788 | |
| 117 | G | A | 0.0000 | |
| 118 | D | A | -0.7588 | |
| 119 | V | A | -0.2628 | |
| 120 | T | A | -1.0825 | |
| 121 | N | A | -1.5666 | |
| 122 | P | A | -0.7878 | |
| 123 | T | A | -0.4940 | |
| 124 | A | A | -0.3395 | |
| 125 | P | A | -0.1645 | |
| 126 | V | A | -0.0930 | |
| 127 | H | A | -0.4825 | |
| 128 | G | A | -1.1252 | |
| 129 | T | A | -0.9925 | |
| 130 | A | A | -1.0305 | |
| 131 | D | A | -2.1894 | |
| 132 | D | A | -1.5452 | |
| 133 | T | A | -1.1369 | |
| 134 | V | A | -0.2770 | |
| 135 | S | A | -0.3134 | |
| 136 | Y | A | -0.1729 | |
| 137 | S | A | -0.1199 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.2242 | |
| 140 | P | A | 0.0000 | |
| 141 | K | A | -0.5084 | |
| 142 | L | A | 0.0000 | |
| 143 | R | A | 0.0000 | |
| 144 | Q | A | 0.0000 | |
| 145 | E | A | 0.0000 | |
| 146 | Y | A | 0.0000 | |
| 147 | V | A | 0.0000 | |
| 148 | I | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | C | A | 0.0000 | |
| 151 | E | A | -0.3564 | |
| 152 | P | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | I | A | -0.2372 | |
| 155 | G | A | 0.0000 | |
| 156 | V | A | -1.3111 | |
| 157 | Y | A | -1.5325 | |
| 158 | T | A | -2.1332 | |
| 159 | T | A | 0.0000 | |
| 160 | K | A | -2.1433 | |
| 161 | A | A | -1.3238 | |
| 162 | A | A | -0.3135 | |
| 163 | P | A | 0.0498 | |
| 164 | C | A | 0.5469 | |
| 165 | P | A | 0.0171 | |
| 166 | G | A | -0.1494 | |
| 167 | L | A | 0.4381 | |
| 168 | P | A | -0.1769 | |
| 169 | P | A | -0.3791 | |
| 170 | G | A | -0.1881 | |
| 171 | A | A | 0.4527 | |
| 172 | C | A | 0.8052 | |
| 173 | P | A | -0.2394 | |
| 174 | P | A | -0.2883 | |
| 175 | T | A | -1.4251 | |
| 176 | E | A | -2.3521 | |
| 177 | R | A | -3.2478 | |
| 178 | K | A | -3.0186 | |
| 179 | E | A | -2.5366 | |
| 180 | S | A | -1.0132 | |
| 181 | L | A | -0.4382 | |
| 182 | I | A | 0.0000 | |
| 183 | E | A | -1.0285 | |
| 184 | D | A | 0.0000 | |
| 185 | G | A | -0.6597 | |
| 186 | D | A | -0.5792 | |
| 187 | M | A | 0.0000 | |
| 188 | C | A | 0.0000 | |
| 189 | D | A | 0.0000 | |
| 190 | I | A | 0.0000 | |
| 191 | G | A | -0.1299 | |
| 192 | F | A | -0.0392 | |
| 193 | G | A | -0.3418 | |
| 194 | A | A | -0.5956 | |
| 195 | K | A | -1.4370 | |
| 196 | D | A | -1.3730 | |
| 197 | F | A | 0.0000 | |
| 198 | A | A | -1.9555 | |
| 199 | E | A | -2.5142 | |
| 200 | L | A | -1.3826 | |
| 201 | L | A | -1.2110 | |
| 202 | P | A | -1.2612 | |
| 203 | T | A | -0.9568 | |
| 204 | K | A | -2.3919 | |
| 205 | D | A | -1.6510 | |
| 206 | D | A | -1.1544 | |
| 207 | V | A | 0.0000 | |
| 208 | P | A | 0.0000 | |
| 209 | D | A | -1.3173 | |
| 210 | I | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | L | A | -1.1431 | |
| 213 | D | A | -2.1929 | |
| 214 | T | A | -1.0642 | |
| 215 | V | A | -0.4853 | |
| 216 | C | A | 0.0000 | |
| 217 | K | A | 0.0000 | |
| 218 | E | A | -0.6566 | |
| 219 | I | A | 0.0000 | |
| 220 | D | A | 0.0000 | |
| 221 | Y | A | -1.2571 | |
| 222 | E | A | -2.3620 | |
| 223 | G | A | -1.6882 | |
| 224 | M | A | 0.0000 | |
| 225 | K | A | -2.2815 | |
| 226 | A | A | -1.4262 | |
| 227 | E | A | -1.2610 | |
| 228 | P | A | -0.5704 | |
| 229 | T | A | -0.3383 | |
| 230 | G | A | 0.0000 | |
| 231 | D | A | 0.0000 | |
| 232 | R | A | -0.5682 | |
| 233 | M | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | T | A | -0.2234 | |
| 236 | W | A | -0.2299 | |
| 237 | D | A | -0.8624 | |
| 238 | R | A | -1.0441 | |
| 239 | Y | A | -0.7633 | |
| 240 | E | A | -1.4231 | |
| 241 | K | A | -1.0993 | |
| 242 | S | A | -0.4296 | |
| 243 | Y | A | 0.1066 | |
| 244 | P | A | -0.4177 | |
| 245 | S | A | -0.6142 | |
| 246 | K | A | -1.3841 | |
| 247 | N | A | -0.9423 | |
| 248 | L | A | 0.0000 | |
| 249 | V | A | 0.0000 | |
| 250 | R | A | 0.0000 | |
| 251 | D | A | -1.2265 | |
| 252 | G | A | -0.9752 | |
| 253 | P | A | -0.3872 | |
| 254 | D | A | 0.1447 | |
| 255 | L | A | 1.3195 | |
| 256 | Y | A | 1.6954 | |
| 257 | P | A | 0.3450 | |
| 258 | L | A | 0.3771 | |
| 259 | P | A | -0.7239 | |
| 260 | D | A | -2.1713 | |
| 261 | A | A | 0.0000 | |
| 262 | Q | A | -1.8886 | |
| 263 | P | A | -1.1563 | |
| 264 | P | A | -0.6134 | |
| 265 | S | A | -0.5899 | |
| 266 | P | A | 0.2922 | |
| 267 | L | A | 1.1632 | |
| 268 | Y | A | 0.4064 | |
| 269 | T | A | -0.5745 | |
| 270 | K | A | -0.9736 | |
| 271 | P | A | -0.3887 | |
| 272 | P | A | -0.4410 | |
| 273 | P | A | -0.2819 | |
| 274 | S | A | -0.5063 | |
| 275 | S | A | -0.2712 | |
| 276 | P | A | -0.2803 | |
| 277 | H | A | -0.3178 | |
| 278 | W | A | 0.4998 | |
| 279 | I | A | 1.3763 | |
| 280 | R | A | -0.0665 | |
| 281 | P | A | -0.3074 | |
| 282 | P | A | -0.3841 | |
| 283 | Y | A | -0.1183 | |
| 284 | N | A | -0.4928 | |
| 285 | Y | A | 0.7524 | |
| 286 | F | A | 0.2959 | |
| 287 | T | A | -0.0906 | |
| 288 | I | A | 0.0000 | |
| 289 | P | A | 0.0000 | |
| 290 | D | A | -0.4371 | |
| 291 | A | A | 0.0000 | |
| 292 | G | A | -0.9657 | |
| 293 | E | A | -1.8718 | |
| 294 | I | A | -1.2117 | |
| 295 | T | A | -1.3233 | |
| 296 | E | A | -1.8419 | |
| 297 | S | A | -1.1700 | |
| 298 | D | A | -1.1837 | |
| 299 | L | A | -0.7081 | |
| 300 | L | A | -0.6914 | |
| 301 | F | A | 0.0000 | |
| 302 | N | A | -1.1775 | |
| 303 | K | A | -1.7568 | |
| 304 | P | A | -0.7251 | |
| 305 | V | A | -0.2011 | |
| 306 | F | A | -0.4440 | |
| 307 | L | A | 0.0000 | |
| 308 | E | A | -2.3769 | |
| 309 | Q | A | -2.1720 | |
| 310 | T | A | -1.1095 | |
| 311 | P | A | -0.8051 | |
| 312 | G | A | -0.6771 | |
| 313 | L | A | -0.2264 | |
| 314 | N | A | 0.0000 | |
| 315 | H | A | -0.8476 | |
| 316 | G | A | 0.0000 | |
| 317 | I | A | 0.0000 | |
| 318 | C | A | 0.0000 | |
| 319 | W | A | 0.0000 | |
| 320 | G | A | -0.2686 | |
| 321 | N | A | -0.4885 | |
| 322 | T | A | -0.4797 | |
| 323 | L | A | 0.0000 | |
| 324 | Y | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | T | A | 0.0000 | |
| 327 | V | A | 0.0000 | |
| 328 | V | A | 0.0000 | |
| 329 | D | A | 0.0000 | |
| 330 | N | A | 0.0000 | |
| 331 | S | A | 0.0000 | |
| 332 | R | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | E | A | -2.3091 | |
| 335 | I | A | -1.8687 | |
| 336 | E | A | -2.5968 | |
| 337 | T | A | -2.0490 | |
| 338 | K | A | -1.7368 | |
| 339 | T | A | -0.2350 | |
| 340 | T | A | 0.3366 | |
| 341 | Q | A | 0.4841 | |
| 342 | I | A | 1.9544 | |
| 343 | S | A | 0.7225 | |
| 344 | T | A | 0.0824 | |
| 345 | P | A | 0.2257 | |
| 346 | A | A | 0.1994 | |
| 347 | P | A | -0.1379 | |
| 348 | N | A | -0.2978 | |
| 349 | V | A | 1.5169 | |
| 350 | Y | A | 1.4383 | |
| 351 | N | A | 0.1115 | |
| 352 | P | A | 0.2014 | |
| 353 | A | A | 0.4273 | |
| 354 | N | A | 0.6586 | |
| 355 | Y | A | 1.2092 | |
| 356 | I | A | 1.9623 | |
| 357 | T | A | 0.1151 | |
| 358 | S | A | -0.8980 | |
| 359 | K | A | -1.7780 | |
| 360 | T | A | -1.4535 | |
| 361 | Y | A | 0.0000 | |
| 362 | T | A | -0.6860 | |
| 363 | R | A | 0.0000 | |
| 364 | Q | A | 0.0549 | |
| 365 | Y | A | 0.0000 | |
| 366 | Q | A | -0.3928 | |
| 367 | L | A | 0.0000 | |
| 368 | S | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | V | A | 0.0000 | |
| 371 | V | A | 0.0000 | |
| 372 | Q | A | -0.5423 | |
| 373 | L | A | 0.0000 | |
| 374 | C | A | 0.0000 | |
| 375 | R | A | -1.0409 | |
| 376 | I | A | 0.0000 | |
| 377 | P | A | -0.5806 | |
| 378 | L | A | -0.0939 | |
| 379 | T | A | -0.6611 | |
| 380 | P | A | -1.0143 | |
| 381 | E | A | -1.8220 | |
| 382 | T | A | 0.0000 | |
| 383 | L | A | -0.5653 | |
| 384 | A | A | -1.0057 | |
| 385 | Y | A | 0.0000 | |
| 386 | L | A | 0.0000 | |
| 387 | A | A | -1.0200 | |
| 388 | R | A | -2.0295 | |
| 389 | R | A | -1.1566 | |
| 390 | D | A | 0.0000 | |
| 391 | P | A | -0.4112 | |
| 392 | R | A | -0.2957 | |
| 393 | F | A | 0.2879 | |
| 394 | L | A | 0.6841 | |
| 395 | V | A | 1.1145 | |
| 396 | N | A | -0.4053 | |
| 397 | A | A | -0.7066 | |
| 398 | R | A | -1.4312 | |
| 399 | L | A | 0.0000 | |
| 400 | P | A | 0.2965 | |
| 401 | F | A | 1.8007 | |
| 402 | I | A | 1.6048 | |
| 403 | P | A | 0.8473 | |
| 404 | P | A | 0.6025 | |
| 405 | V | A | 1.4179 | |
| 406 | T | A | -0.1817 | |
| 407 | R | A | -1.7549 | |
| 408 | P | A | -1.6788 | |
| 409 | D | A | -2.1216 | |
| 410 | P | A | -1.2971 | |
| 411 | L | A | -0.8292 | |
| 412 | A | A | -1.0304 | |
| 413 | G | A | -1.1901 | |
| 414 | H | A | -1.4098 | |
| 415 | K | A | -2.3424 | |
| 416 | F | A | -1.5685 | |
| 417 | H | A | -1.6583 | |
| 418 | E | A | -2.5338 | |
| 419 | I | A | -1.8377 | |
| 420 | D | A | -2.5587 | |
| 421 | L | A | 0.0000 | |
| 422 | T | A | -1.4307 | |
| 423 | N | A | -1.9545 | |
| 424 | R | A | -2.0206 | |
| 425 | L | A | -0.8070 | |
| 426 | S | A | -0.9407 | |
| 427 | T | A | -0.5640 | |
| 428 | N | A | -1.4987 | |
| 429 | L | A | 0.0000 | |
| 430 | S | A | -1.8854 | |
| 431 | E | A | -2.6802 | |
| 432 | S | A | 0.0000 | |
| 433 | E | A | -1.7506 | |
| 434 | L | A | 0.0000 | |
| 435 | G | A | 0.0000 | |
| 436 | R | A | -2.3265 | |
| 437 | L | A | -0.8052 | |
| 438 | Y | A | -0.4351 | |
| 439 | L | A | -0.0661 | |
| 440 | N | A | -1.6837 | |
| 441 | R | A | -1.9651 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine