| Chain sequence(s) |
H: EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQRYNRAPYTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1309 | |
| 2 | V | H | -1.1665 | |
| 3 | Q | H | -1.2293 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0366 | |
| 6 | E | H | 0.3944 | |
| 7 | S | H | -0.1648 | |
| 8 | G | H | -0.4435 | |
| 9 | G | H | 0.1735 | |
| 11 | G | H | 0.8413 | |
| 12 | L | H | 1.5252 | |
| 13 | V | H | -0.1169 | |
| 14 | Q | H | -1.2032 | |
| 15 | P | H | -1.8253 | |
| 16 | G | H | -2.0648 | |
| 17 | R | H | -2.5957 | |
| 18 | S | H | -1.6338 | |
| 19 | L | H | -0.8848 | |
| 20 | R | H | -1.2347 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2054 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1793 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0872 | |
| 27 | G | H | -1.3488 | |
| 28 | F | H | -0.8449 | |
| 29 | T | H | -0.8530 | |
| 30 | F | H | 0.0000 | |
| 35 | D | H | -2.2790 | |
| 36 | D | H | -0.9928 | |
| 37 | Y | H | 0.1485 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7048 | |
| 45 | A | H | -1.0858 | |
| 46 | P | H | -0.8543 | |
| 47 | G | H | -1.5288 | |
| 48 | K | H | -2.3441 | |
| 49 | G | H | -1.5899 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0074 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | 0.0000 | |
| 58 | W | H | -1.0343 | |
| 59 | N | H | -2.0036 | |
| 62 | S | H | -1.1970 | |
| 63 | G | H | -1.1127 | |
| 64 | H | H | -0.9548 | |
| 65 | I | H | 0.3562 | |
| 66 | D | H | -0.5702 | |
| 67 | Y | H | -0.8099 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.6527 | |
| 70 | S | H | -1.7185 | |
| 71 | V | H | 0.0000 | |
| 72 | E | H | -2.6602 | |
| 74 | G | H | -1.7339 | |
| 75 | R | H | -1.3793 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6159 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1440 | |
| 80 | R | H | -1.1404 | |
| 81 | D | H | -1.6590 | |
| 82 | N | H | -2.1586 | |
| 83 | A | H | -1.5126 | |
| 84 | K | H | -2.4759 | |
| 85 | N | H | -2.1822 | |
| 86 | S | H | -1.2088 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3282 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7838 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.6233 | |
| 93 | S | H | -1.6747 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3801 | |
| 96 | A | H | -1.5909 | |
| 97 | E | H | -2.2211 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4016 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5120 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | V | H | 0.0000 | |
| 108 | S | H | 0.0000 | |
| 109 | Y | H | 1.9215 | |
| 110 | L | H | 1.8947 | |
| 111 | S | H | 0.8579 | |
| 112A | T | H | 0.0902 | |
| 112 | A | H | -0.2264 | |
| 113 | S | H | 0.3124 | |
| 114 | S | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.2044 | |
| 117 | Y | H | 0.3828 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1886 | |
| 121 | G | H | -0.3646 | |
| 122 | T | H | 0.4329 | |
| 123 | L | H | 1.3572 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3943 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4488 | |
| 128 | S | H | -0.3104 | |
| 1 | D | L | -2.3709 | |
| 2 | I | L | -2.0254 | |
| 3 | Q | L | -2.1869 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4016 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7327 | |
| 8 | P | L | -0.5949 | |
| 9 | S | L | -1.0015 | |
| 10 | S | L | -1.3162 | |
| 11 | L | L | -1.0357 | |
| 12 | S | L | -1.4036 | |
| 13 | A | L | -1.1626 | |
| 14 | S | L | -0.8331 | |
| 15 | V | L | 0.0044 | |
| 16 | G | L | -0.6518 | |
| 17 | D | L | -1.7461 | |
| 18 | R | L | -2.3049 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6506 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8111 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8036 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9876 | |
| 27 | Q | L | -2.4962 | |
| 28 | G | L | -2.1119 | |
| 29 | I | L | 0.0000 | |
| 36 | R | L | -2.5955 | |
| 37 | N | L | -1.6112 | |
| 38 | Y | L | -0.8567 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8308 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8066 | |
| 46 | P | L | -1.2693 | |
| 47 | G | L | -1.7132 | |
| 48 | K | L | -2.4976 | |
| 49 | A | L | -1.4955 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0428 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1688 | |
| 56 | A | L | -0.2887 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.2878 | |
| 66 | T | L | 0.0273 | |
| 67 | L | L | 0.2969 | |
| 68 | Q | L | -0.2134 | |
| 69 | S | L | -0.3681 | |
| 70 | G | L | -0.5026 | |
| 71 | V | L | -0.3128 | |
| 72 | P | L | -0.3671 | |
| 74 | S | L | -0.4410 | |
| 75 | R | L | -0.8434 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3471 | |
| 78 | G | L | -0.2590 | |
| 79 | S | L | -0.7026 | |
| 80 | G | L | -1.3703 | |
| 83 | S | L | -1.7598 | |
| 84 | G | L | -2.1249 | |
| 85 | T | L | -2.2725 | |
| 86 | D | L | -2.4539 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7390 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4511 | |
| 93 | S | L | -1.1965 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7491 | |
| 96 | P | L | -1.1933 | |
| 97 | E | L | -1.7938 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -1.1994 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.3264 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | R | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | N | L | -1.4650 | |
| 109 | R | L | -2.0129 | |
| 114 | A | L | -1.1425 | |
| 115 | P | L | -1.4213 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.9359 | |
| 118 | F | L | -0.4244 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7767 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.3672 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -2.0710 | |
| 126 | I | L | -1.1090 | |
| 127 | K | L | -1.6872 |