Project name: 6CR1

Status: done

Started: 2026-03-29 08:23:18
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Chain sequence(s) H: EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQRYNRAPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-2.8036
Maximal score value
1.9215
Average score
-0.6713
Total score value
-153.0581

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1309
2 V H -1.1665
3 Q H -1.2293
4 L H 0.0000
5 V H 1.0366
6 E H 0.3944
7 S H -0.1648
8 G H -0.4435
9 G H 0.1735
11 G H 0.8413
12 L H 1.5252
13 V H -0.1169
14 Q H -1.2032
15 P H -1.8253
16 G H -2.0648
17 R H -2.5957
18 S H -1.6338
19 L H -0.8848
20 R H -1.2347
21 L H 0.0000
22 S H -0.2054
23 C H 0.0000
24 A H -0.1793
25 A H 0.0000
26 S H -1.0872
27 G H -1.3488
28 F H -0.8449
29 T H -0.8530
30 F H 0.0000
35 D H -2.2790
36 D H -0.9928
37 Y H 0.1485
38 A H 0.0000
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7048
45 A H -1.0858
46 P H -0.8543
47 G H -1.5288
48 K H -2.3441
49 G H -1.5899
50 L H 0.0000
51 E H -1.0074
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 A H 0.0000
56 I H 0.0000
57 T H 0.0000
58 W H -1.0343
59 N H -2.0036
62 S H -1.1970
63 G H -1.1127
64 H H -0.9548
65 I H 0.3562
66 D H -0.5702
67 Y H -0.8099
68 A H 0.0000
69 D H -2.6527
70 S H -1.7185
71 V H 0.0000
72 E H -2.6602
74 G H -1.7339
75 R H -1.3793
76 F H 0.0000
77 T H -0.6159
78 I H 0.0000
79 S H -0.1440
80 R H -1.1404
81 D H -1.6590
82 N H -2.1586
83 A H -1.5126
84 K H -2.4759
85 N H -2.1822
86 S H -1.2088
87 L H 0.0000
88 Y H -0.3282
89 L H 0.0000
90 Q H -0.7838
91 M H 0.0000
92 N H -1.6233
93 S H -1.6747
94 L H 0.0000
95 R H -2.3801
96 A H -1.5909
97 E H -2.2211
98 D H 0.0000
99 T H -0.4016
100 A H 0.0000
101 V H 0.5120
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 V H 0.0000
108 S H 0.0000
109 Y H 1.9215
110 L H 1.8947
111 S H 0.8579
112A T H 0.0902
112 A H -0.2264
113 S H 0.3124
114 S H 0.0000
115 L H 0.0000
116 D H 0.2044
117 Y H 0.3828
118 W H 0.0000
119 G H 0.0000
120 Q H -1.1886
121 G H -0.3646
122 T H 0.4329
123 L H 1.3572
124 V H 0.0000
125 T H 0.3943
126 V H 0.0000
127 S H -0.4488
128 S H -0.3104
1 D L -2.3709
2 I L -2.0254
3 Q L -2.1869
4 M L 0.0000
5 T L -1.4016
6 Q L 0.0000
7 S L -0.7327
8 P L -0.5949
9 S L -1.0015
10 S L -1.3162
11 L L -1.0357
12 S L -1.4036
13 A L -1.1626
14 S L -0.8331
15 V L 0.0044
16 G L -0.6518
17 D L -1.7461
18 R L -2.3049
19 V L 0.0000
20 T L -0.6506
21 I L 0.0000
22 T L -0.8111
23 C L 0.0000
24 R L -2.8036
25 A L 0.0000
26 S L -1.9876
27 Q L -2.4962
28 G L -2.1119
29 I L 0.0000
36 R L -2.5955
37 N L -1.6112
38 Y L -0.8567
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8308
44 Q L 0.0000
45 K L -1.8066
46 P L -1.2693
47 G L -1.7132
48 K L -2.4976
49 A L -1.4955
50 P L 0.0000
51 K L -1.0428
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1688
56 A L -0.2887
57 A L 0.0000
65 S L -0.2878
66 T L 0.0273
67 L L 0.2969
68 Q L -0.2134
69 S L -0.3681
70 G L -0.5026
71 V L -0.3128
72 P L -0.3671
74 S L -0.4410
75 R L -0.8434
76 F L 0.0000
77 S L -0.3471
78 G L -0.2590
79 S L -0.7026
80 G L -1.3703
83 S L -1.7598
84 G L -2.1249
85 T L -2.2725
86 D L -2.4539
87 F L 0.0000
88 T L -0.7390
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.4511
93 S L -1.1965
94 L L 0.0000
95 Q L -0.7491
96 P L -1.1933
97 E L -1.7938
98 D L 0.0000
99 V L -1.1994
100 A L 0.0000
101 T L -1.3264
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 R L 0.0000
107 Y L 0.0000
108 N L -1.4650
109 R L -2.0129
114 A L -1.1425
115 P L -1.4213
116 Y L 0.0000
117 T L -0.9359
118 F L -0.4244
119 G L 0.0000
120 Q L -1.7767
121 G L 0.0000
122 T L 0.0000
123 K L -2.3672
124 V L 0.0000
125 E L -2.0710
126 I L -1.1090
127 K L -1.6872
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Laboratory of Theory of Biopolymers 2018