| Chain sequence(s) |
A: MSHHHHHHSGKKQMQKLLEEKWPELREILKEMYKVDWYLYSDIDWKIFSGDFDFLERVREIAKRTKHEPVKSVLEKFVQFIDEVEAKVKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:49)
[INFO] Main: Simulation completed successfully. (00:02:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3559 | |
| 2 | S | A | -0.8612 | |
| 3 | H | A | -1.9495 | |
| 4 | H | A | -2.4323 | |
| 5 | H | A | -2.7328 | |
| 6 | H | A | -3.1419 | |
| 7 | H | A | -3.3425 | |
| 8 | H | A | -3.4693 | |
| 9 | S | A | -3.0311 | |
| 10 | G | A | -3.2169 | |
| 11 | K | A | -4.0362 | |
| 12 | K | A | -4.0961 | |
| 13 | Q | A | -3.4413 | |
| 14 | M | A | -2.3877 | |
| 15 | Q | A | -3.4419 | |
| 16 | K | A | -3.8865 | |
| 17 | L | A | -2.2362 | |
| 18 | L | A | -2.1502 | |
| 19 | E | A | -3.2305 | |
| 20 | E | A | -3.3877 | |
| 21 | K | A | -3.0173 | |
| 22 | W | A | -2.1530 | |
| 23 | P | A | -2.2625 | |
| 24 | E | A | -2.6846 | |
| 25 | L | A | -1.9137 | |
| 26 | R | A | -2.7589 | |
| 27 | E | A | -2.8747 | |
| 28 | I | A | -0.5657 | |
| 29 | L | A | -1.0230 | |
| 30 | K | A | -1.9330 | |
| 31 | E | A | -1.9192 | |
| 32 | M | A | -0.1109 | |
| 33 | Y | A | 0.7254 | |
| 34 | K | A | -0.9607 | |
| 35 | V | A | 0.8722 | |
| 36 | D | A | 0.8438 | |
| 37 | W | A | 1.7199 | |
| 38 | Y | A | 1.7413 | |
| 39 | L | A | 2.3840 | |
| 40 | Y | A | 1.8733 | |
| 41 | S | A | 0.7393 | |
| 42 | D | A | -0.5246 | |
| 43 | I | A | 0.6005 | |
| 44 | D | A | 0.5300 | |
| 45 | W | A | 0.6161 | |
| 46 | K | A | -0.3298 | |
| 47 | I | A | 0.7805 | |
| 48 | F | A | 1.7837 | |
| 49 | S | A | 0.5451 | |
| 50 | G | A | 0.2625 | |
| 51 | D | A | -0.2018 | |
| 52 | F | A | 0.1805 | |
| 53 | D | A | -1.9331 | |
| 54 | F | A | -1.0400 | |
| 55 | L | A | -0.9720 | |
| 56 | E | A | -2.4305 | |
| 57 | R | A | -2.6911 | |
| 58 | V | A | -1.4123 | |
| 59 | R | A | -2.3317 | |
| 60 | E | A | -2.4238 | |
| 61 | I | A | -1.0311 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -3.1647 | |
| 64 | R | A | -3.0070 | |
| 65 | T | A | -2.4672 | |
| 66 | K | A | -3.0542 | |
| 67 | H | A | -2.6588 | |
| 68 | E | A | -2.1050 | |
| 69 | P | A | -0.7048 | |
| 70 | V | A | 0.6646 | |
| 71 | K | A | -1.3235 | |
| 72 | S | A | -0.5799 | |
| 73 | V | A | 0.9006 | |
| 74 | L | A | 0.0900 | |
| 75 | E | A | -1.3463 | |
| 76 | K | A | -1.4655 | |
| 77 | F | A | -0.2724 | |
| 78 | V | A | -1.1653 | |
| 79 | Q | A | -1.4845 | |
| 80 | F | A | 0.2472 | |
| 81 | I | A | 0.0000 | |
| 82 | D | A | -1.4188 | |
| 83 | E | A | -1.8230 | |
| 84 | V | A | -0.5692 | |
| 85 | E | A | -1.1496 | |
| 86 | A | A | -1.7303 | |
| 87 | K | A | -2.2589 | |
| 88 | V | A | -0.5496 | |
| 89 | K | A | -2.2077 | |
| 90 | N | A | -2.1914 | |
| 91 | S | A | -1.2427 |