Project name: 459a86da2cd5cd1

Status: done

Started: 2026-06-26 11:39:49
Settings
Chain sequence(s) A: MSHHHHHHSGKKQMQKLLEEKWPELREILKEMYKVDWYLYSDIDWKIFSGDFDFLERVREIAKRTKHEPVKSVLEKFVQFIDEVEAKVKNS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:50)
Show buried residues

Minimal score value
-4.0961
Maximal score value
2.384
Average score
-1.3127
Total score value
-119.4547

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3559
2 S A -0.8612
3 H A -1.9495
4 H A -2.4323
5 H A -2.7328
6 H A -3.1419
7 H A -3.3425
8 H A -3.4693
9 S A -3.0311
10 G A -3.2169
11 K A -4.0362
12 K A -4.0961
13 Q A -3.4413
14 M A -2.3877
15 Q A -3.4419
16 K A -3.8865
17 L A -2.2362
18 L A -2.1502
19 E A -3.2305
20 E A -3.3877
21 K A -3.0173
22 W A -2.1530
23 P A -2.2625
24 E A -2.6846
25 L A -1.9137
26 R A -2.7589
27 E A -2.8747
28 I A -0.5657
29 L A -1.0230
30 K A -1.9330
31 E A -1.9192
32 M A -0.1109
33 Y A 0.7254
34 K A -0.9607
35 V A 0.8722
36 D A 0.8438
37 W A 1.7199
38 Y A 1.7413
39 L A 2.3840
40 Y A 1.8733
41 S A 0.7393
42 D A -0.5246
43 I A 0.6005
44 D A 0.5300
45 W A 0.6161
46 K A -0.3298
47 I A 0.7805
48 F A 1.7837
49 S A 0.5451
50 G A 0.2625
51 D A -0.2018
52 F A 0.1805
53 D A -1.9331
54 F A -1.0400
55 L A -0.9720
56 E A -2.4305
57 R A -2.6911
58 V A -1.4123
59 R A -2.3317
60 E A -2.4238
61 I A -1.0311
62 A A 0.0000
63 K A -3.1647
64 R A -3.0070
65 T A -2.4672
66 K A -3.0542
67 H A -2.6588
68 E A -2.1050
69 P A -0.7048
70 V A 0.6646
71 K A -1.3235
72 S A -0.5799
73 V A 0.9006
74 L A 0.0900
75 E A -1.3463
76 K A -1.4655
77 F A -0.2724
78 V A -1.1653
79 Q A -1.4845
80 F A 0.2472
81 I A 0.0000
82 D A -1.4188
83 E A -1.8230
84 V A -0.5692
85 E A -1.1496
86 A A -1.7303
87 K A -2.2589
88 V A -0.5496
89 K A -2.2077
90 N A -2.1914
91 S A -1.2427
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Laboratory of Theory of Biopolymers 2018