Project name: 45c39b2d7fb9e05

Status: done

Started: 2026-02-08 15:55:57
Settings
Chain sequence(s) L: CAEGPYFKPCGYTYC
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-1.8313
Maximal score value
1.8485
Average score
0.3277
Total score value
4.9159

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 C L 0.7997
1 A L -0.1485
2 E L -1.8313
3 G L -0.4591
4 P L -0.0057
5 Y L 1.6530
6 F L 1.8485
7 K L -1.3894
8 P L -0.5070
9 C L 0.3714
10 G L -0.1349
11 Y L 1.4696
12 T L 0.4155
13 Y L 1.5758
14 C L 1.2583
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018