| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGWVLITRSSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7282 | |
| 2 | S | A | 0.3013 | |
| 3 | D | A | -0.3344 | |
| 4 | V | A | -0.8483 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.0121 | |
| 7 | D | A | -3.3731 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1175 | |
| 10 | V | A | 0.0740 | |
| 11 | V | A | 1.5237 | |
| 12 | A | A | 0.8851 | |
| 13 | A | A | 0.2979 | |
| 14 | T | A | -0.5277 | |
| 15 | P | A | -1.1364 | |
| 16 | T | A | -0.9931 | |
| 17 | S | A | -0.5315 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7170 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1308 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2252 | |
| 24 | A | A | -1.6050 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.2306 | |
| 27 | V | A | 0.4024 | |
| 28 | T | A | -0.2117 | |
| 29 | V | A | -0.9744 | |
| 30 | R | A | -1.6174 | |
| 31 | Y | A | -1.1136 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.7607 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5693 | |
| 36 | Y | A | -0.3473 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4749 | |
| 39 | T | A | -1.1960 | |
| 40 | G | A | -1.2104 | |
| 41 | G | A | -1.3242 | |
| 42 | N | A | -1.5148 | |
| 43 | S | A | -0.8313 | |
| 44 | P | A | -0.3411 | |
| 45 | V | A | 0.3883 | |
| 46 | Q | A | -0.9714 | |
| 47 | E | A | -1.6966 | |
| 48 | F | A | -0.6935 | |
| 49 | T | A | -0.2978 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.2005 | |
| 52 | G | A | -1.4217 | |
| 53 | S | A | -1.4037 | |
| 54 | K | A | -2.2458 | |
| 55 | S | A | -1.4353 | |
| 56 | T | A | -0.7868 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2280 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6592 | |
| 61 | G | A | -1.0295 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3463 | |
| 64 | P | A | -1.6415 | |
| 65 | G | A | -1.4161 | |
| 66 | V | A | -1.3829 | |
| 67 | D | A | -2.0231 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7157 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3313 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.4761 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | G | A | 0.6853 | |
| 78 | W | A | 2.5274 | |
| 79 | V | A | 3.2977 | |
| 80 | L | A | 3.5745 | |
| 81 | I | A | 2.8163 | |
| 82 | T | A | 0.5238 | |
| 83 | R | A | -1.5841 | |
| 84 | S | A | -1.2978 | |
| 85 | S | A | 0.0000 | |
| 86 | K | A | -1.8795 | |
| 87 | P | A | -0.9283 | |
| 88 | I | A | -0.5823 | |
| 89 | S | A | -0.5188 | |
| 90 | I | A | -0.5483 | |
| 91 | N | A | -1.7092 | |
| 92 | Y | A | -1.4503 | |
| 93 | R | A | -2.5017 | |
| 94 | T | A | -1.4949 |