| Chain sequence(s) |
L: PAETEYDSLYPEDD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 563 | P | L | -0.2441 | |
| 564 | A | L | -0.3218 | |
| 565 | E | L | -1.8223 | |
| 566 | T | L | -0.7436 | |
| 567 | E | L | -1.5896 | |
| 568 | Y | L | 0.6400 | |
| 569 | D | L | -1.5804 | |
| 570 | S | L | -0.2610 | |
| 571 | L | L | 1.7484 | |
| 572 | Y | L | 1.5401 | |
| 573 | P | L | -0.2915 | |
| 574 | E | L | -2.1921 | |
| 575 | D | L | -2.4472 | |
| 576 | D | L | -2.1161 |