| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGSMSAPFSSYSLGWFRQAPGQGLEAVAAIDPDGSVTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASPNPHAQLMSPSAYDYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6536 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.0986 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8358 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2594 | |
| 8 | G | H | -0.6260 | |
| 9 | G | H | 0.1331 | |
| 10 | G | H | 0.6830 | |
| 11 | L | H | 1.3870 | |
| 12 | V | H | -0.0197 | |
| 13 | Q | H | -1.3287 | |
| 14 | P | H | -1.6705 | |
| 15 | G | H | -1.5293 | |
| 16 | G | H | -1.0819 | |
| 17 | S | H | -1.3343 | |
| 18 | L | H | -1.0660 | |
| 19 | R | H | -2.3618 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5309 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2352 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.0242 | |
| 26 | G | H | -1.3503 | |
| 27 | S | H | -1.0591 | |
| 28 | M | H | -0.7677 | |
| 29 | S | H | -0.5230 | |
| 30 | A | H | -0.3027 | |
| 31 | P | H | -0.5781 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.3130 | |
| 34 | S | H | -0.9016 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | 0.0000 | |
| 42 | Q | H | -0.7368 | |
| 43 | A | H | -1.0223 | |
| 44 | P | H | -0.9257 | |
| 45 | G | H | -1.2963 | |
| 46 | Q | H | -1.8481 | |
| 47 | G | H | -1.2512 | |
| 48 | L | H | -0.5290 | |
| 49 | E | H | -0.9181 | |
| 50 | A | H | -0.1738 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | D | H | -1.0239 | |
| 56 | P | H | -1.5096 | |
| 57 | D | H | -2.0449 | |
| 58 | G | H | -1.0836 | |
| 59 | S | H | -0.3085 | |
| 60 | V | H | 0.7172 | |
| 61 | T | H | 0.8183 | |
| 62 | Y | H | 0.9613 | |
| 63 | Y | H | -0.3081 | |
| 64 | A | H | -1.2059 | |
| 65 | D | H | -2.3185 | |
| 66 | S | H | -1.7955 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.4444 | |
| 69 | G | H | -1.8022 | |
| 70 | R | H | -1.5404 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -0.9979 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.7956 | |
| 75 | R | H | -1.4030 | |
| 76 | D | H | -2.0126 | |
| 77 | N | H | -2.1069 | |
| 78 | S | H | -1.6872 | |
| 79 | K | H | -2.4658 | |
| 80 | N | H | -1.8806 | |
| 81 | T | H | -1.1364 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.7424 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -2.0967 | |
| 88 | S | H | -1.4988 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -2.4160 | |
| 91 | A | H | -1.7447 | |
| 92 | E | H | -2.2595 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.4369 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.7492 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.3110 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | S | H | 0.0000 | |
| 103 | P | H | -1.3562 | |
| 104 | N | H | -1.9639 | |
| 105 | P | H | -1.6739 | |
| 106 | H | H | -1.2870 | |
| 107 | A | H | 0.0000 | |
| 108 | Q | H | 0.1006 | |
| 109 | L | H | 1.1935 | |
| 110 | M | H | 0.8057 | |
| 111 | S | H | 0.2701 | |
| 112 | P | H | -0.2340 | |
| 113 | S | H | -0.3971 | |
| 114 | A | H | -0.6101 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -1.8231 | |
| 117 | Y | H | -0.8182 | |
| 118 | W | H | -0.1509 | |
| 119 | G | H | -0.1011 | |
| 120 | Q | H | -0.8540 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.6245 | |
| 123 | L | H | 1.7109 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3417 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7904 |