Project name: gp63_004

Status: done

Started: 2026-04-27 14:51:05
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGSMSAPFSSYSLGWFRQAPGQGLEAVAAIDPDGSVTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASPNPHAQLMSPSAYDYWGQGTLVTVS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-2.4658
Maximal score value
1.7109
Average score
-0.5969
Total score value
-75.8004

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6536
2 V H 0.0000
3 Q H -1.0986
4 L H 0.0000
5 V H 0.8358
6 E H 0.0000
7 S H -0.2594
8 G H -0.6260
9 G H 0.1331
10 G H 0.6830
11 L H 1.3870
12 V H -0.0197
13 Q H -1.3287
14 P H -1.6705
15 G H -1.5293
16 G H -1.0819
17 S H -1.3343
18 L H -1.0660
19 R H -2.3618
20 L H 0.0000
21 S H -0.5309
22 C H 0.0000
23 A H -0.2352
24 A H 0.0000
25 S H -1.0242
26 G H -1.3503
27 S H -1.0591
28 M H -0.7677
29 S H -0.5230
30 A H -0.3027
31 P H -0.5781
32 F H 0.0000
33 S H -1.3130
34 S H -0.9016
35 Y H 0.0000
36 S H 0.0000
37 L H 0.0000
38 G H 0.0000
39 W H 0.0000
40 F H 0.0000
41 R H 0.0000
42 Q H -0.7368
43 A H -1.0223
44 P H -0.9257
45 G H -1.2963
46 Q H -1.8481
47 G H -1.2512
48 L H -0.5290
49 E H -0.9181
50 A H -0.1738
51 V H 0.0000
52 A H 0.0000
53 A H 0.0000
54 I H 0.0000
55 D H -1.0239
56 P H -1.5096
57 D H -2.0449
58 G H -1.0836
59 S H -0.3085
60 V H 0.7172
61 T H 0.8183
62 Y H 0.9613
63 Y H -0.3081
64 A H -1.2059
65 D H -2.3185
66 S H -1.7955
67 V H 0.0000
68 K H -2.4444
69 G H -1.8022
70 R H -1.5404
71 F H 0.0000
72 T H -0.9979
73 I H 0.0000
74 S H -0.7956
75 R H -1.4030
76 D H -2.0126
77 N H -2.1069
78 S H -1.6872
79 K H -2.4658
80 N H -1.8806
81 T H -1.1364
82 L H 0.0000
83 Y H 0.0000
84 L H 0.0000
85 Q H -1.7424
86 M H 0.0000
87 N H -2.0967
88 S H -1.4988
89 L H 0.0000
90 R H -2.4160
91 A H -1.7447
92 E H -2.2595
93 D H 0.0000
94 T H -0.4369
95 A H 0.0000
96 V H 0.7492
97 Y H 0.0000
98 Y H 0.3110
99 C H 0.0000
100 A H 0.0000
101 A H 0.0000
102 S H 0.0000
103 P H -1.3562
104 N H -1.9639
105 P H -1.6739
106 H H -1.2870
107 A H 0.0000
108 Q H 0.1006
109 L H 1.1935
110 M H 0.8057
111 S H 0.2701
112 P H -0.2340
113 S H -0.3971
114 A H -0.6101
115 Y H 0.0000
116 D H -1.8231
117 Y H -0.8182
118 W H -0.1509
119 G H -0.1011
120 Q H -0.8540
121 G H 0.0000
122 T H 0.6245
123 L H 1.7109
124 V H 0.0000
125 T H 0.3417
126 V H 0.0000
127 S H -0.7904
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Laboratory of Theory of Biopolymers 2018