| Chain sequence(s) |
A: MSHHHHHHSGSLVEEAKKEAKKMEEAAKKKDWDKVLDLAGKVDKLFDEFDKLKAAGKATEEEVKGMEEPMKIWDEVMEKFLEHEREERKKREENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:09)
[INFO] Main: Simulation completed successfully. (00:06:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4584 | |
| 2 | S | A | -0.6709 | |
| 3 | H | A | -1.7713 | |
| 4 | H | A | -2.3440 | |
| 5 | H | A | -2.6103 | |
| 6 | H | A | -2.6650 | |
| 7 | H | A | -2.5950 | |
| 8 | H | A | -2.2018 | |
| 9 | S | A | 0.0000 | |
| 10 | G | A | -2.1073 | |
| 11 | S | A | -1.7866 | |
| 12 | L | A | 0.0000 | |
| 13 | V | A | 0.0000 | |
| 14 | E | A | -3.0669 | |
| 15 | E | A | -2.9195 | |
| 16 | A | A | 0.0000 | |
| 17 | K | A | -3.2450 | |
| 18 | K | A | -3.4618 | |
| 19 | E | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | K | A | -3.6112 | |
| 22 | K | A | -3.5140 | |
| 23 | M | A | 0.0000 | |
| 24 | E | A | -3.6851 | |
| 25 | E | A | -4.5366 | |
| 26 | A | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | K | A | -4.4213 | |
| 29 | K | A | -4.4981 | |
| 30 | K | A | -4.6430 | |
| 31 | D | A | -4.2314 | |
| 32 | W | A | -3.0354 | |
| 33 | D | A | -3.0897 | |
| 34 | K | A | -3.5067 | |
| 35 | V | A | 0.0000 | |
| 36 | L | A | -1.2701 | |
| 37 | D | A | -2.4938 | |
| 38 | L | A | 0.0000 | |
| 39 | A | A | 0.0000 | |
| 40 | G | A | -1.7480 | |
| 41 | K | A | -2.1666 | |
| 42 | V | A | 0.0000 | |
| 43 | D | A | -2.7137 | |
| 44 | K | A | -3.6008 | |
| 45 | L | A | -2.7775 | |
| 46 | F | A | -2.6454 | |
| 47 | D | A | -4.2615 | |
| 48 | E | A | -3.9285 | |
| 49 | F | A | 0.0000 | |
| 50 | D | A | -4.2130 | |
| 51 | K | A | -3.8786 | |
| 52 | L | A | -3.0481 | |
| 53 | K | A | -3.4162 | |
| 54 | A | A | -1.9470 | |
| 55 | A | A | -1.6735 | |
| 56 | G | A | -1.9980 | |
| 57 | K | A | -2.9247 | |
| 58 | A | A | -2.7356 | |
| 59 | T | A | -2.4819 | |
| 60 | E | A | -3.2456 | |
| 61 | E | A | -3.3200 | |
| 62 | E | A | -2.9338 | |
| 63 | V | A | -2.7333 | |
| 64 | K | A | -3.5108 | |
| 65 | G | A | -2.8309 | |
| 66 | M | A | 0.0000 | |
| 67 | E | A | -3.1040 | |
| 68 | E | A | -3.3465 | |
| 69 | P | A | 0.0000 | |
| 70 | M | A | -2.2072 | |
| 71 | K | A | -3.3494 | |
| 72 | I | A | -2.8351 | |
| 73 | W | A | -2.6648 | |
| 74 | D | A | -3.7362 | |
| 75 | E | A | -3.9486 | |
| 76 | V | A | 0.0000 | |
| 77 | M | A | -2.4689 | |
| 78 | E | A | -3.8220 | |
| 79 | K | A | -3.9477 | |
| 80 | F | A | -2.5803 | |
| 81 | L | A | -2.3879 | |
| 82 | E | A | -3.8190 | |
| 83 | H | A | -3.6025 | |
| 84 | E | A | -3.9829 | |
| 85 | R | A | -4.7781 | |
| 86 | E | A | -5.6455 | |
| 87 | E | A | -6.3565 | |
| 88 | R | A | -6.4948 | |
| 89 | K | A | -6.7215 | |
| 90 | K | A | -6.7872 | |
| 91 | R | A | -6.5413 | |
| 92 | E | A | -5.8507 | |
| 93 | E | A | -5.3839 | |
| 94 | N | A | -4.1026 | |
| 95 | S | A | -2.8505 |