Project name: clone35

Status: done

Started: 2026-07-28 07:00:29
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Chain sequence(s) H: QVQLQESGPGLVKPSETLSLTCSVSGASIKSYYWSWFRQPPGKRLEWIGYYYYSETSNYNPSLKSRVTMSLDTSKNHFSLRLRSVTAADTAIYYCAKQGGGWSAGFAEFWCAKQGGGWSAGFAEFWGQGLLVTVSS
L: QIVMTQSPATLSVSPGERATLSCRASLSVTNNLAWYQQKPGQAPRLLIYGASTRATGIPVRFSGGGSGTEFTLTISNVQSEDFAVYTCQQYNMWPLSFGGGTKVEIR
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-2.8252
Maximal score value
1.5166
Average score
-0.4867
Total score value
-118.2775

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5842
2 V H 0.0000
3 Q H -1.7503
4 L H 0.0000
5 Q H -1.3220
6 E H 0.0000
7 S H -0.5726
8 G H -0.3496
9 P H 0.0463
11 G H 0.4553
12 L H 0.8883
13 V H 0.0000
14 K H -1.6507
15 P H -1.3675
16 S H -1.5554
17 E H -2.2466
18 T H -1.8851
19 L H 0.0000
20 S H -1.2679
21 L H 0.0000
22 T H -0.7196
23 C H 0.0000
24 S H -1.1008
25 V H 0.0000
26 S H -1.2414
27 G H -1.2955
28 A H -1.0097
29 S H -1.0732
30 I H 0.0000
35 K H -1.3924
36 S H -0.5409
37 Y H 0.1617
38 Y H 0.0910
39 W H 0.0000
40 S H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -0.9621
45 P H -0.9901
46 P H -1.0357
47 G H -1.6737
48 K H -2.7310
49 R H -2.3101
50 L H 0.0000
51 E H -0.9311
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 Y H 0.0000
57 Y H -0.2159
58 Y H -0.5443
59 S H -0.7933
63 E H -1.4092
64 T H -0.6938
65 S H -0.4986
66 N H -0.5556
67 Y H -0.5974
68 N H 0.0000
69 P H -1.1092
70 S H -0.8863
71 L H 0.0000
72 K H -2.0565
74 S H -1.3823
75 R H -1.6794
76 V H 0.0000
77 T H -1.2538
78 M H 0.0000
79 S H -0.7083
80 L H -0.9435
81 D H -1.4421
82 T H -1.3741
83 S H -1.3575
84 K H -2.2447
85 N H -1.8424
86 H H -1.3807
87 F H 0.0000
88 S H -0.7301
89 L H 0.0000
90 R H -2.1883
91 L H 0.0000
92 R H -1.9210
93 S H -1.5916
94 V H 0.0000
95 T H -0.6475
96 A H -0.2046
97 A H 0.0538
98 D H 0.0000
99 T H 0.2611
100 A H 0.0000
101 I H 0.5120
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 Q H 0.0000
108 G H 0.0363
109 G H 0.3067
110 G H 0.4398
111 W H 1.0709
111A S H 0.5070
111B A H 0.3627
111C G H 0.0954
111D F H 0.4453
111E A H -0.3021
111F E H -0.5578
111G F H 1.5166
111H W H 1.3128
112I C H 0.3917
112H A H -0.4898
112G K H -1.9999
112F Q H -2.0853
112E G H -1.5983
112D G H -0.8124
112C G H 0.1353
112B W H 0.8279
112A S H 0.0000
112 A H 0.2507
113 G H 0.0000
114 F H 0.0000
115 A H 0.0000
116 E H -0.4643
117 F H -0.3172
118 W H -0.5835
119 G H 0.0000
120 Q H -1.5070
121 G H -0.5357
122 L H 0.2135
123 L H 0.8785
124 V H 0.0000
125 T H 0.3938
126 V H 0.0000
127 S H -0.4067
128 S H -0.5730
1 Q L -0.4947
2 I L 0.0000
3 V L 0.9914
4 M L 0.0000
5 T L -0.6706
6 Q L -0.8750
7 S L -0.8002
8 P L -0.4443
9 A L -0.3687
10 T L -0.4625
11 L L -0.1414
12 S L -0.3316
13 V L 0.0000
14 S L -1.0625
15 P L -1.4240
16 G L -1.8823
17 E L -2.3479
18 R L -2.8252
19 A L 0.0000
20 T L -0.6243
21 L L 0.0000
22 S L -0.9325
23 C L 0.0000
24 R L -2.0747
25 A L 0.0000
26 S L 0.1625
27 L L 0.8904
28 S L -0.2116
29 V L 0.0000
36 T L -0.8382
37 N L -1.4839
38 N L -0.8258
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.5368
44 Q L -0.7892
45 K L -1.2241
46 P L -0.8306
47 G L -1.3105
48 Q L -1.7639
49 A L -1.1065
50 P L 0.0000
51 R L -1.0016
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1448
56 G L -0.5999
57 A L 0.0000
65 S L -0.7580
66 T L -0.5768
67 R L -0.5846
68 A L 0.0000
69 T L -0.5191
70 G L -0.3353
71 I L -0.0114
72 P L 0.4608
74 V L 1.3750
75 R L -0.1235
76 F L 0.0000
77 S L -0.1083
78 G L -0.5029
79 G L -0.8754
80 G L -1.4485
83 S L -1.4698
84 G L -0.9498
85 T L -1.1637
86 E L -2.0060
87 F L 0.0000
88 T L -0.8461
89 L L 0.0000
90 T L -0.7334
91 I L 0.0000
92 S L -1.7479
93 N L -2.5254
94 V L 0.0000
95 Q L -1.5950
96 S L -0.9245
97 E L -1.8637
98 D L 0.0000
99 F L -0.2938
100 A L 0.0000
101 V L -0.1461
102 Y L 0.0000
103 T L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 N L -0.0821
109 M L 0.5254
114 W L 0.4437
115 P L 0.0000
116 L L 0.0000
117 S L 0.0000
118 F L 0.0000
119 G L 0.0000
120 G L -1.0139
121 G L -0.9636
122 T L 0.0000
123 K L -0.8466
124 V L 0.0000
125 E L -0.0206
126 I L 0.7414
127 R L -1.0127
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Laboratory of Theory of Biopolymers 2018