Project name: IVKGH20

Status: done

Started: 2026-02-10 05:56:16
Settings
Chain sequence(s) A: IVKGH
C: IVKGH
B: IVKGH
E: IVKGH
D: IVKGH
G: IVKGH
F: IVKGH
I: IVKGH
H: IVKGH
K: IVKGH
J: IVKGH
M: IVKGH
L: IVKGH
O: IVKGH
N: IVKGH
Q: IVKGH
P: IVKGH
S: IVKGH
R: IVKGH
T: IVKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:24)
Show buried residues

Minimal score value
-2.8692
Maximal score value
2.7148
Average score
-0.4995
Total score value
-49.9452

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 2.7148
2 V A 1.2483
3 K A -1.5020
4 G A -1.7640
5 H A -2.1752
1 I B 2.1987
2 V B 0.7511
3 K B -1.5801
4 G B -2.0841
5 H B -2.8692
1 I C 2.2263
2 V C 0.5306
3 K C -1.8169
4 G C -1.8057
5 H C -2.0667
1 I D 2.3510
2 V D 1.3591
3 K D -1.4038
4 G D -1.7601
5 H D -2.1359
1 I E 1.6756
2 V E 1.2624
3 K E -1.2351
4 G E -1.4359
5 H E -1.9158
1 I F 1.8952
2 V F 0.4676
3 K F -1.8916
4 G F -2.2497
5 H F -1.9617
1 I G 2.0373
2 V G 0.0000
3 K G -1.2563
4 G G -1.5099
5 H G -2.3082
1 I H 2.0021
2 V H 0.0896
3 K H -1.7157
4 G H -1.8202
5 H H -1.6710
1 I I 2.0170
2 V I 0.7753
3 K I -1.6270
4 G I -1.4670
5 H I -1.5486
1 I J 1.8722
2 V J 0.3469
3 K J -1.6550
4 G J -1.7590
5 H J -1.4927
1 I K 2.3183
2 V K 0.7346
3 K K -1.9097
4 G K -1.8040
5 H K -2.1247
1 I L 2.0090
2 V L 0.4035
3 K L -1.9057
4 G L -2.0885
5 H L -2.1486
1 I M 2.3265
2 V M 1.0635
3 K M -1.4650
4 G M -1.7964
5 H M -2.1766
1 I N 1.5759
2 V N -0.0211
3 K N -2.1615
4 G N -1.9758
5 H N -1.8819
1 I O 2.3433
2 V O 1.1990
3 K O -1.2777
4 G O -1.5006
5 H O -1.9803
1 I P 2.0583
2 V P 0.5294
3 K P -1.0961
4 G P -1.6235
5 H P -2.0549
1 I Q 2.2946
2 V Q 0.8398
3 K Q -1.1370
4 G Q -1.9334
5 H Q -2.1161
1 I R 2.1311
2 V R 0.7767
3 K R -1.8845
4 G R -2.0559
5 H R -1.7810
1 I S 2.5918
2 V S 1.1189
3 K S -1.4791
4 G S -1.3118
5 H S -1.6248
1 I T 2.6114
2 V T 1.4499
3 K T -1.5953
4 G T -2.0212
5 H T -2.7250
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Laboratory of Theory of Biopolymers 2018