| Chain sequence(s) |
A: KLVFFAE
C: KLVFFAE B: KLVFFAE D: KLVFFAE input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.3149 | |
| 2 | L | A | 0.3585 | |
| 3 | V | A | 2.1880 | |
| 4 | F | A | 3.3409 | |
| 5 | F | A | 2.1755 | |
| 6 | A | A | -0.1739 | |
| 7 | E | A | -2.2620 | |
| 1 | K | B | -2.0643 | |
| 2 | L | B | 0.5428 | |
| 3 | V | B | 2.3344 | |
| 4 | F | B | 3.3813 | |
| 5 | F | B | 2.1235 | |
| 6 | A | B | -0.2748 | |
| 7 | E | B | -2.3605 | |
| 1 | K | C | -1.4586 | |
| 2 | L | C | 1.4881 | |
| 3 | V | C | 3.2904 | |
| 4 | F | C | 4.0261 | |
| 5 | F | C | 2.9429 | |
| 6 | A | C | 0.4049 | |
| 7 | E | C | -1.8784 | |
| 1 | K | D | -1.4248 | |
| 2 | L | D | 1.4780 | |
| 3 | V | D | 3.2527 | |
| 4 | F | D | 3.9252 | |
| 5 | F | D | 2.8279 | |
| 6 | A | D | 0.2852 | |
| 7 | E | D | -1.9959 |