Project name: 28.D10D10

Status: done

Started: 2026-07-07 08:50:47
Settings
Chain sequence(s) H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATMSTGGSYTYYLNSVKGRFTISRDNAKNILYLQMSSLKSEDTAMYYCTRHRGLPDYNGSRGDYYAMDYWGQGTSVTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQEPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPYTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:33)
Show buried residues

Minimal score value
-3.6364
Maximal score value
1.1882
Average score
-0.7056
Total score value
-165.8125

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9671
2 V H -0.8701
3 Q H -0.7091
4 L H 0.0000
5 V H 1.1882
6 E H 0.0000
7 S H -0.4825
8 G H -1.1837
9 G H -1.1349
11 D H -1.5215
12 L H 0.2477
13 V H -0.7666
14 K H -1.9839
15 P H -1.7318
16 G H -1.4641
17 G H -1.0048
18 S H -1.0503
19 L H -1.1392
20 K H -1.8248
21 L H 0.0000
22 S H -0.1733
23 C H 0.0000
24 A H 0.1462
25 A H 0.0000
26 S H -0.7811
27 G H -1.1173
28 F H -0.4542
29 T H -0.2355
30 F H 0.0000
35 S H -0.7521
36 S H -0.3489
37 Y H -0.1785
38 G H 0.0000
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 T H -2.2187
46 P H -2.1576
47 D H -3.2625
48 K H -3.6364
49 R H -3.4589
50 L H 0.0000
51 E H -1.1319
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 M H 0.0000
57 S H -0.0537
58 T H -0.2944
59 G H -0.5812
62 G H -0.2878
63 S H 0.1758
64 Y H 1.1269
65 T H 0.7195
66 Y H 0.3329
67 Y H -0.5353
68 L H -0.8793
69 N H -2.0078
70 S H -1.6347
71 V H 0.0000
72 K H -2.3101
74 G H -1.6076
75 R H -1.4519
76 F H 0.0000
77 T H -0.8449
78 I H 0.0000
79 S H -0.2852
80 R H -0.8157
81 D H -1.2231
82 N H -1.5609
83 A H -1.2438
84 K H -2.1327
85 N H -1.5758
86 I H -0.4690
87 L H 0.0000
88 Y H -0.3573
89 L H 0.0000
90 Q H -1.3975
91 M H 0.0000
92 S H -1.0541
93 S H -1.1341
94 L H 0.0000
95 K H -2.3072
96 S H -1.9519
97 E H -2.3700
98 D H 0.0000
99 T H -0.6908
100 A H 0.0000
101 M H -0.2852
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H 0.0000
107 H H 0.0000
108 R H -0.5280
109 G H -1.0894
110 L H -0.5028
111 P H -0.7940
111A D H -1.3125
111B Y H -0.1596
111C N H -1.3546
111D G H -1.3764
112D S H -1.5204
112C R H -2.6079
112B G H -1.8835
112A D H -2.2532
112 Y H -0.9968
113 Y H -0.4248
114 A H 0.0000
115 M H 0.0000
116 D H 0.0061
117 Y H 0.5340
118 W H 0.0000
119 G H 0.0000
120 Q H -1.1713
121 G H -0.3645
122 T H -0.4880
123 S H -0.5547
124 V H 0.0000
125 T H -0.6277
126 V H 0.0000
127 S H -0.9196
128 S H -0.7163
1 D L -2.4614
2 I L 0.0000
3 Q L -2.2995
4 M L 0.0000
5 T L -1.3841
6 Q L -1.1024
7 S L -0.7333
8 P L -0.5283
9 S L -0.6969
10 S L -0.8592
11 L L -0.5036
12 S L -0.6544
13 A L 0.0000
14 S L -0.6523
15 L L 0.2399
16 G L -1.2472
17 E L -2.4726
18 R L -2.5626
19 V L 0.0000
20 S L -0.6086
21 L L 0.0000
22 T L -0.8247
23 C L 0.0000
24 R L -2.8944
25 A L 0.0000
26 S L -2.3130
27 Q L -2.8643
28 D L -2.8318
29 I L 0.0000
36 G L -1.0882
37 S L -0.7325
38 S L -0.3312
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 E L -1.4013
46 P L -1.3886
47 D L -2.2023
48 G L -1.6388
49 T L -1.1376
50 I L 0.0000
51 K L -0.5018
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0642
56 A L -0.0502
57 T L 0.0000
65 S L -0.4040
66 S L -0.0635
67 L L -0.2117
68 D L -0.3410
69 S L -0.4815
70 G L -0.7984
71 V L 0.0000
72 P L -1.1125
74 K L -1.8827
75 R L -1.5428
76 F L 0.0000
77 S L -0.6254
78 G L -0.4188
79 S L -0.8350
80 R L -1.5218
83 S L -1.1991
84 G L -1.3785
85 S L -1.9961
86 D L -1.8943
87 Y L 0.0000
88 S L -0.8185
89 L L 0.0000
90 T L -0.6364
91 I L 0.0000
92 S L -1.6780
93 S L -1.5894
94 L L 0.0000
95 E L -1.5791
96 S L -1.2117
97 E L -2.2792
98 D L 0.0000
99 F L -0.7512
100 V L 0.0000
101 D L -1.1386
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 A L -0.5812
109 S L -0.4854
114 S L -0.5962
115 P L -0.7621
116 Y L 0.0000
117 T L -0.7670
118 F L 0.0000
119 G L 0.0000
120 G L -1.4953
121 G L 0.0000
122 T L 0.0000
123 K L -1.3789
124 L L 0.0000
125 E L -1.0937
126 I L 0.6446
127 K L -0.9921
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Laboratory of Theory of Biopolymers 2018