| Chain sequence(s) |
H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATMSTGGSYTYYLNSVKGRFTISRDNAKNILYLQMSSLKSEDTAMYYCTRHRGLPDYNGSRGDYYAMDYWGQGTSVTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQEPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9671 | |
| 2 | V | H | -0.8701 | |
| 3 | Q | H | -0.7091 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1882 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4825 | |
| 8 | G | H | -1.1837 | |
| 9 | G | H | -1.1349 | |
| 11 | D | H | -1.5215 | |
| 12 | L | H | 0.2477 | |
| 13 | V | H | -0.7666 | |
| 14 | K | H | -1.9839 | |
| 15 | P | H | -1.7318 | |
| 16 | G | H | -1.4641 | |
| 17 | G | H | -1.0048 | |
| 18 | S | H | -1.0503 | |
| 19 | L | H | -1.1392 | |
| 20 | K | H | -1.8248 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1733 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.1462 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7811 | |
| 27 | G | H | -1.1173 | |
| 28 | F | H | -0.4542 | |
| 29 | T | H | -0.2355 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7521 | |
| 36 | S | H | -0.3489 | |
| 37 | Y | H | -0.1785 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.2187 | |
| 46 | P | H | -2.1576 | |
| 47 | D | H | -3.2625 | |
| 48 | K | H | -3.6364 | |
| 49 | R | H | -3.4589 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1319 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | M | H | 0.0000 | |
| 57 | S | H | -0.0537 | |
| 58 | T | H | -0.2944 | |
| 59 | G | H | -0.5812 | |
| 62 | G | H | -0.2878 | |
| 63 | S | H | 0.1758 | |
| 64 | Y | H | 1.1269 | |
| 65 | T | H | 0.7195 | |
| 66 | Y | H | 0.3329 | |
| 67 | Y | H | -0.5353 | |
| 68 | L | H | -0.8793 | |
| 69 | N | H | -2.0078 | |
| 70 | S | H | -1.6347 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3101 | |
| 74 | G | H | -1.6076 | |
| 75 | R | H | -1.4519 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8449 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2852 | |
| 80 | R | H | -0.8157 | |
| 81 | D | H | -1.2231 | |
| 82 | N | H | -1.5609 | |
| 83 | A | H | -1.2438 | |
| 84 | K | H | -2.1327 | |
| 85 | N | H | -1.5758 | |
| 86 | I | H | -0.4690 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3573 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3975 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.0541 | |
| 93 | S | H | -1.1341 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.3072 | |
| 96 | S | H | -1.9519 | |
| 97 | E | H | -2.3700 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6908 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.2852 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | R | H | -0.5280 | |
| 109 | G | H | -1.0894 | |
| 110 | L | H | -0.5028 | |
| 111 | P | H | -0.7940 | |
| 111A | D | H | -1.3125 | |
| 111B | Y | H | -0.1596 | |
| 111C | N | H | -1.3546 | |
| 111D | G | H | -1.3764 | |
| 112D | S | H | -1.5204 | |
| 112C | R | H | -2.6079 | |
| 112B | G | H | -1.8835 | |
| 112A | D | H | -2.2532 | |
| 112 | Y | H | -0.9968 | |
| 113 | Y | H | -0.4248 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0061 | |
| 117 | Y | H | 0.5340 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1713 | |
| 121 | G | H | -0.3645 | |
| 122 | T | H | -0.4880 | |
| 123 | S | H | -0.5547 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.6277 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9196 | |
| 128 | S | H | -0.7163 | |
| 1 | D | L | -2.4614 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2995 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3841 | |
| 6 | Q | L | -1.1024 | |
| 7 | S | L | -0.7333 | |
| 8 | P | L | -0.5283 | |
| 9 | S | L | -0.6969 | |
| 10 | S | L | -0.8592 | |
| 11 | L | L | -0.5036 | |
| 12 | S | L | -0.6544 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6523 | |
| 15 | L | L | 0.2399 | |
| 16 | G | L | -1.2472 | |
| 17 | E | L | -2.4726 | |
| 18 | R | L | -2.5626 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6086 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8247 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8944 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.3130 | |
| 27 | Q | L | -2.8643 | |
| 28 | D | L | -2.8318 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -1.0882 | |
| 37 | S | L | -0.7325 | |
| 38 | S | L | -0.3312 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | E | L | -1.4013 | |
| 46 | P | L | -1.3886 | |
| 47 | D | L | -2.2023 | |
| 48 | G | L | -1.6388 | |
| 49 | T | L | -1.1376 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.5018 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0642 | |
| 56 | A | L | -0.0502 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.4040 | |
| 66 | S | L | -0.0635 | |
| 67 | L | L | -0.2117 | |
| 68 | D | L | -0.3410 | |
| 69 | S | L | -0.4815 | |
| 70 | G | L | -0.7984 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.1125 | |
| 74 | K | L | -1.8827 | |
| 75 | R | L | -1.5428 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6254 | |
| 78 | G | L | -0.4188 | |
| 79 | S | L | -0.8350 | |
| 80 | R | L | -1.5218 | |
| 83 | S | L | -1.1991 | |
| 84 | G | L | -1.3785 | |
| 85 | S | L | -1.9961 | |
| 86 | D | L | -1.8943 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.8185 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6364 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6780 | |
| 93 | S | L | -1.5894 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.5791 | |
| 96 | S | L | -1.2117 | |
| 97 | E | L | -2.2792 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7512 | |
| 100 | V | L | 0.0000 | |
| 101 | D | L | -1.1386 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | A | L | -0.5812 | |
| 109 | S | L | -0.4854 | |
| 114 | S | L | -0.5962 | |
| 115 | P | L | -0.7621 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.7670 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.4953 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3789 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0937 | |
| 126 | I | L | 0.6446 | |
| 127 | K | L | -0.9921 |