Project name: query_structure

Status: done

Started: 2025-11-29 10:12:43
Settings
Chain sequence(s) A: DTIPCGESCVWIPCISSILGCSCKDKVCYHN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:29)
Show buried residues

Minimal score value
-2.5263
Maximal score value
3.012
Average score
0.2188
Total score value
6.7832

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.1039
2 T A -0.4031
3 I A 1.0265
4 P A 0.1462
5 C A 0.3323
6 G A -0.2775
7 E A 0.0651
8 S A 0.2349
9 C A 0.8227
10 V A 1.7124
11 W A 2.0306
12 I A 1.5888
13 P A 1.0469
14 C A 0.0000
15 I A 2.5595
16 S A 1.8876
17 S A 1.8139
18 I A 3.0120
19 L A 2.3990
20 G A 0.7867
21 C A 0.0000
22 S A -0.3470
23 C A -0.6452
24 K A -2.1249
25 D A -2.5263
26 K A -1.6834
27 V A -0.7768
28 C A 0.0000
29 Y A -0.8989
30 H A -1.0227
31 N A -1.8722
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Laboratory of Theory of Biopolymers 2018