| Chain sequence(s) |
L: KRFAEYAPNID
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 434 | K | L | -2.0335 | |
| 435 | R | L | -1.8023 | |
| 436 | F | L | 1.6098 | |
| 437 | A | L | -0.1946 | |
| 438 | E | L | -1.5830 | |
| 439 | Y | L | 0.9912 | |
| 440 | A | L | 0.2026 | |
| 441 | P | L | -0.4844 | |
| 442 | N | L | -1.0778 | |
| 443 | I | L | 0.7811 | |
| 444 | D | L | -1.5497 |