| Chain sequence(s) |
B: APQSVRLAWLSRGPLEKKGQRVAESTVIGAGLQAVSISVSGGTLTVTLRL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.1990 | |
| 2 | P | B | -0.0841 | |
| 3 | Q | B | -0.7307 | |
| 4 | S | B | -0.1173 | |
| 5 | V | B | -0.3396 | |
| 6 | R | B | -1.8277 | |
| 7 | L | B | -0.9415 | |
| 8 | A | B | -0.6277 | |
| 9 | W | B | 0.6593 | |
| 10 | L | B | 0.1982 | |
| 11 | S | B | -1.0262 | |
| 12 | R | B | -2.7338 | |
| 13 | G | B | -1.6172 | |
| 14 | P | B | -0.4519 | |
| 15 | L | B | 0.0933 | |
| 16 | E | B | -2.2129 | |
| 17 | K | B | -3.0118 | |
| 18 | K | B | -3.4048 | |
| 19 | G | B | -2.5975 | |
| 20 | Q | B | -2.2436 | |
| 21 | R | B | -1.6016 | |
| 22 | V | B | 0.5520 | |
| 23 | A | B | -0.2335 | |
| 24 | E | B | -1.8627 | |
| 25 | S | B | -1.1724 | |
| 26 | T | B | -0.5683 | |
| 27 | V | B | 0.7083 | |
| 28 | I | B | 1.6268 | |
| 29 | G | B | 0.7013 | |
| 30 | A | B | 0.0037 | |
| 31 | G | B | -0.3143 | |
| 32 | L | B | 0.0183 | |
| 33 | Q | B | -0.9743 | |
| 34 | A | B | 0.2827 | |
| 35 | V | B | 1.1689 | |
| 36 | S | B | 1.0693 | |
| 37 | I | B | 2.5398 | |
| 38 | S | B | 1.7289 | |
| 39 | V | B | 2.1032 | |
| 40 | S | B | 0.4030 | |
| 41 | G | B | -0.3137 | |
| 42 | G | B | -0.2363 | |
| 43 | T | B | 0.4197 | |
| 44 | L | B | 1.6805 | |
| 45 | T | B | 1.3598 | |
| 46 | V | B | 1.5810 | |
| 47 | T | B | 0.4935 | |
| 48 | L | B | 0.1775 | |
| 49 | R | B | -1.0190 | |
| 50 | L | B | 0.6627 |