Chain sequence(s) |
A: PVRIDNPVGGFSFALPAGWVESDDAAHFDYGSSALLSKTTGDPPFPGQPPPVANNDTRRIVVLGRLDDQQKKLLYYATDSKAAARLGSDMGEFYMPYPGTRINQETTVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGSPPQQRWFVVWLLGTANNPVDKGAAKALAESIRRPLV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48) [INFO] Main: Simulation completed successfully. (00:01:49) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
110 | P | A | 0.3831 | |
111 | V | A | 1.2251 | |
112 | R | A | -0.5897 | |
113 | I | A | -0.7176 | |
114 | D | A | -1.7411 | |
115 | N | A | 0.0000 | |
116 | P | A | 0.2888 | |
117 | V | A | 1.2328 | |
118 | G | A | 0.0000 | |
119 | G | A | 0.2628 | |
120 | F | A | 0.0000 | |
121 | S | A | 0.0000 | |
122 | F | A | 0.0000 | |
123 | A | A | -0.1494 | |
124 | L | A | 0.3821 | |
125 | P | A | 0.1381 | |
126 | A | A | 0.0963 | |
127 | G | A | -0.4008 | |
128 | W | A | 0.0000 | |
129 | V | A | -0.2165 | |
130 | E | A | -1.4983 | |
131 | S | A | -1.4613 | |
132 | D | A | -2.0334 | |
133 | A | A | -1.3461 | |
134 | A | A | -0.8131 | |
135 | H | A | -0.6010 | |
136 | F | A | -0.3064 | |
137 | D | A | -0.6740 | |
138 | Y | A | 0.8548 | |
139 | G | A | 0.0000 | |
140 | S | A | 0.0000 | |
141 | A | A | 0.0000 | |
142 | L | A | 0.0000 | |
143 | L | A | 0.0000 | |
144 | S | A | -1.0187 | |
145 | K | A | -0.9467 | |
146 | T | A | -0.7515 | |
147 | T | A | -0.8872 | |
148 | G | A | -1.3683 | |
149 | D | A | -1.9877 | |
150 | P | A | -1.1088 | |
151 | P | A | -0.3876 | |
152 | F | A | 0.9595 | |
153 | P | A | -0.0340 | |
154 | G | A | -0.7536 | |
155 | Q | A | -1.1065 | |
156 | P | A | -0.6285 | |
157 | P | A | -0.6031 | |
158 | P | A | -0.7047 | |
159 | V | A | -0.0515 | |
160 | A | A | -0.7613 | |
161 | N | A | -1.4944 | |
162 | D | A | -1.3732 | |
163 | T | A | 0.0000 | |
164 | R | A | -1.0148 | |
165 | I | A | 0.0000 | |
166 | V | A | 0.0000 | |
167 | L | A | 0.0000 | |
168 | G | A | 0.0000 | |
169 | R | A | -0.5796 | |
170 | L | A | 0.0000 | |
171 | D | A | -1.5741 | |
172 | Q | A | -2.1901 | |
173 | K | A | -1.9455 | |
174 | L | A | -0.3157 | |
175 | Y | A | -0.3415 | |
180 | A | A | -0.4093 | |
181 | T | A | -0.6715 | |
182 | D | A | -1.3036 | |
183 | S | A | -1.2215 | |
184 | K | A | -1.6573 | |
185 | A | A | 0.0000 | |
186 | A | A | 0.0000 | |
187 | A | A | -1.4304 | |
188 | R | A | -2.2557 | |
189 | L | A | 0.0000 | |
190 | G | A | 0.0000 | |
191 | S | A | -1.3975 | |
192 | D | A | -1.7710 | |
193 | M | A | -0.5776 | |
194 | G | A | 0.0000 | |
195 | E | A | -1.1225 | |
196 | F | A | 0.9331 | |
197 | Y | A | 0.6114 | |
198 | M | A | 0.1410 | |
199 | P | A | 0.0029 | |
200 | Y | A | 0.4882 | |
201 | P | A | -0.5808 | |
202 | G | A | -1.2006 | |
203 | T | A | -1.1560 | |
204 | R | A | -1.9274 | |
205 | I | A | -1.7312 | |
206 | N | A | -2.3958 | |
207 | Q | A | -2.6094 | |
208 | E | A | -2.1178 | |
209 | T | A | -0.9142 | |
210 | V | A | -0.6221 | |
211 | S | A | -0.7508 | |
212 | L | A | 0.0000 | |
213 | D | A | -2.5579 | |
214 | A | A | 0.0000 | |
215 | N | A | -2.1962 | |
216 | G | A | -1.6822 | |
217 | V | A | -1.3993 | |
218 | S | A | -1.5369 | |
219 | G | A | 0.0000 | |
220 | S | A | 0.0000 | |
221 | A | A | 0.0000 | |
222 | S | A | -0.9746 | |
223 | Y | A | 0.0000 | |
224 | Y | A | 0.0000 | |
225 | E | A | -1.6569 | |
226 | V | A | 0.0000 | |
227 | K | A | -2.2636 | |
228 | F | A | -1.4303 | |
229 | S | A | -1.1407 | |
230 | D | A | -1.4955 | |
231 | P | A | -1.2090 | |
232 | S | A | -0.9194 | |
233 | K | A | -1.1240 | |
234 | P | A | -1.2785 | |
235 | N | A | -1.4687 | |
236 | G | A | 0.0000 | |
237 | Q | A | -1.0046 | |
238 | I | A | 0.0000 | |
239 | W | A | 0.0000 | |
240 | T | A | 0.0000 | |
241 | G | A | 0.0000 | |
242 | V | A | 0.0000 | |
243 | I | A | 0.0000 | |
244 | G | A | -0.9332 | |
245 | S | A | -0.7508 | |
246 | P | A | -0.5158 | |
256 | P | A | -0.8137 | |
257 | Q | A | -1.1684 | |
258 | R | A | -1.1239 | |
259 | W | A | 0.0000 | |
260 | F | A | -0.0610 | |
261 | V | A | 0.0000 | |
262 | V | A | 0.0000 | |
263 | W | A | 0.0000 | |
264 | L | A | -0.3542 | |
265 | G | A | 0.0000 | |
266 | T | A | -0.8669 | |
267 | A | A | -1.1134 | |
268 | N | A | -1.5347 | |
269 | N | A | -1.5125 | |
270 | P | A | -1.3282 | |
271 | V | A | 0.0000 | |
272 | D | A | -2.4063 | |
273 | K | A | -1.9951 | |
274 | G | A | -1.5537 | |
275 | A | A | -1.2675 | |
276 | A | A | 0.0000 | |
277 | K | A | -1.5483 | |
278 | A | A | -1.0167 | |
279 | L | A | 0.0000 | |
280 | A | A | 0.0000 | |
281 | E | A | -1.6084 | |
282 | S | A | -1.0516 | |
283 | I | A | 0.0000 | |
284 | R | A | -0.7766 | |
285 | P | A | 0.0442 | |
286 | L | A | 1.0215 | |
287 | V | A | 1.9139 |